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Series GSE105577 Query DataSets for GSE105577
Status Public on Oct 23, 2017
Title ChIP-seq from K562 (ENCSR359NFW)
Project ENCODE
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary eGFP-USF2 ChIP-seq on human K562

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR359NFW/
 
Citation(s) 22955616
BioProject PRJNA63443
Submission date Oct 20, 2017
Last update date Jul 25, 2021
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM2827331 ChIP-seq from K562 (ENCLB386PFE)
GSM2827332 ChIP-seq from K562 (ENCLB892MQS)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE105577_ENCFF003GOA_conservative_idr_thresholded_peaks_hg19.bed.gz 260.6 Kb (ftp)(http) BED
GSE105577_ENCFF028VRH_signal_p-value_GRCh38.bigWig 304.0 Mb (ftp)(http) BIGWIG
GSE105577_ENCFF058DFD_peaks_hg19.bed.gz 5.9 Mb (ftp)(http) BED
GSE105577_ENCFF208VCB_optimal_idr_thresholded_peaks_GRCh38.bed.gz 306.4 Kb (ftp)(http) BED
GSE105577_ENCFF287GHP_conservative_idr_thresholded_peaks_hg19.bigBed 475.1 Kb (ftp)(http) BIGBED
GSE105577_ENCFF417TXD_optimal_idr_thresholded_peaks_hg19.bed.gz 261.0 Kb (ftp)(http) BED
GSE105577_ENCFF422EKQ_optimal_idr_thresholded_peaks_hg19.bigBed 475.3 Kb (ftp)(http) BIGBED
GSE105577_ENCFF457UYN_fold_change_over_control_GRCh38.bigWig 461.4 Mb (ftp)(http) BIGWIG
GSE105577_ENCFF509LOB_peaks_GRCh38.bed.gz 5.7 Mb (ftp)(http) BED
GSE105577_ENCFF585WCX_fold_change_over_control_hg19.bigWig 458.7 Mb (ftp)(http) BIGWIG
GSE105577_ENCFF766EAB_signal_p-value_hg19.bigWig 303.0 Mb (ftp)(http) BIGWIG
GSE105577_ENCFF935UJJ_peaks_GRCh38.bigBed 12.5 Mb (ftp)(http) BIGBED
GSE105577_ENCFF961KUU_optimal_idr_thresholded_peaks_GRCh38.bigBed 664.3 Kb (ftp)(http) BIGBED
GSE105577_ENCFF969ETX_peaks_hg19.bigBed 12.6 Mb (ftp)(http) BIGBED
GSE105577_RAW.tar 2.3 Gb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run SelectorHelp
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record

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