GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Series GSE105363

Query DataSets for GSE105363

Status

Public on Oct 20, 2017

Title

ChIP-seq from K562 (ENCSR178NTX)

Project

ENCODE

Organism

Homo sapiens

Experiment type

Genome binding/occupancy profiling by high throughput sequencing

Summary

eGFP-CUX1 ChIP-seq on human K562

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

Overall design

https://www.encodeproject.org/ENCSR178NTX/

Citation(s)

22955616

BioProject

PRJNA63443

Submission date

Oct 20, 2017

Last update date

Jul 25, 2021

Contact name

ENCODE DCC

E-mail(s)

encode-help@lists.stanford.edu

Organization name

ENCODE DCC

Street address

300 Pasteur Dr

City

Stanford

State/province

ZIP/Postal code

94305-5120

Country

USA

Platforms (1)

GPL16791

Illumina HiSeq 2500 (Homo sapiens)

Samples (2)

GSM2825540	ChIP-seq from K562 (ENCLB516VHP)
GSM2825541	ChIP-seq from K562 (ENCLB637IGI)

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE105363_ENCFF082KHJ_optimal_idr_thresholded_peaks_GRCh38.bed.gz	131.6 Kb	(ftp)(http)	BED
GSE105363_ENCFF193JMA_conservative_idr_thresholded_peaks_hg19.bed.gz	100.2 Kb	(ftp)(http)	BED
GSE105363_ENCFF269RQQ_optimal_idr_thresholded_peaks_GRCh38.bigBed	369.2 Kb	(ftp)(http)	BIGBED
GSE105363_ENCFF364UJT_peaks_GRCh38.bigBed	12.2 Mb	(ftp)(http)	BIGBED
GSE105363_ENCFF526PFS_optimal_idr_thresholded_peaks_hg19.bigBed	231.9 Kb	(ftp)(http)	BIGBED
GSE105363_ENCFF600ROI_peaks_GRCh38.bed.gz	6.2 Mb	(ftp)(http)	BED
GSE105363_ENCFF615DHV_conservative_idr_thresholded_peaks_hg19.bigBed	224.3 Kb	(ftp)(http)	BIGBED
GSE105363_ENCFF695CPH_optimal_idr_thresholded_peaks_hg19.bed.gz	105.7 Kb	(ftp)(http)	BED
GSE105363_ENCFF697RVN_conservative_idr_thresholded_peaks_GRCh38.bigBed	360.0 Kb	(ftp)(http)	BIGBED
GSE105363_ENCFF758WOZ_peaks_hg19.bed.gz	6.4 Mb	(ftp)(http)	BED
GSE105363_ENCFF769QZE_fold_change_over_control_hg19.bigWig	679.9 Mb	(ftp)(http)	BIGWIG
GSE105363_ENCFF834DYD_conservative_idr_thresholded_peaks_GRCh38.bed.gz	127.4 Kb	(ftp)(http)	BED
GSE105363_ENCFF888EUI_peaks_hg19.bigBed	12.2 Mb	(ftp)(http)	BIGBED
GSE105363_ENCFF893ZTX_signal_p-value_GRCh38.bigWig	408.9 Mb	(ftp)(http)	BIGWIG
GSE105363_ENCFF897IOX_fold_change_over_control_GRCh38.bigWig	689.9 Mb	(ftp)(http)	BIGWIG
GSE105363_ENCFF912HUI_signal_p-value_hg19.bigWig	399.8 Mb	(ftp)(http)	BIGWIG
GSE105363_RAW.tar	3.4 Gb	(http)(custom)	TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run Selector
Raw data provided as supplementary file
Processed data provided as supplementary file
Processed data are available on Series record