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Series GSE105159 Query DataSets for GSE105159
Status Public on Nov 01, 2017
Title Selective endosteal remodeling of blood vessels in acute myeloid leukemia promotes malignancy at the expense of hematopoietic stem cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Hematopoietic stem cell (HSC) function requires bone marrow vascular niches, which have been proposed to be co-opted by leukemia cells to support their propagation. Acute myeloid leukemia (AML) cells produce angiogenic factors; however, anti-angiogenic therapies have not improved AML patient outcome. Using intravital microscopy we uncovered hierarchical vascular remodeling with AML progression. AML cells outcompete non-malignant hematopoiesis by gradual elimination of stroma cells, endosteal endothelium, and osteoblastic cells. While central marrow remains vascularized and splenic vascular niches expand, the remodeled endosteal regions lose the ability to retain HSCs. Overall, the endosteal endothelium microenvironment is altered by AML, yet by preserving it we rescue HSC loss and promote chemotherapeutic efficacy. Our findings suggest therapies targeting the endosteal vasculature may improve existing AML therapeutic regimes.
 
Overall design RNA-Seq analysis on different AML clones versus HSC controls
 
Contributor(s) Duarte D
Citation(s) 29276143
Submission date Oct 19, 2017
Last update date May 15, 2019
Contact name Isabella Kong
Organization name The Walter and Eliza Hall Institute of Medical Research
Street address 1G Royal Parade
City Parkville
State/province VIC
ZIP/Postal code 3052
Country Australia
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (27)
GSM2823493 AML-mTmG-clone-3-BM_S31
GSM2823494 AML-mTmG-clone-3-BM_S32
GSM2823495 AML-mTmG-clone-3-BM_S33
Relations
BioProject PRJNA414975
SRA SRP120494

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Supplementary file Size Download File type/resource
GSE105159_AML_CPM.xlsx 2.1 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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