NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE105121 Query DataSets for GSE105121
Status Public on Nov 05, 2020
Title TET1 KO affects Sox9 function [growth plate tissue]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report that TET1 mediated 5hmC deposition is necessary for Sox9 function in embryonic cartilage development
 
Overall design We examine the transcriptional changes after TET1 KO in E17.5 mouse chondrocytes
 
Contributor(s) Grandi F, Smeriglio P, Bhutani N
Citation(s) 33134768
Submission date Oct 18, 2017
Last update date Jul 25, 2021
Contact name Nidhi Bhutani
E-mail(s) nbhutani@stanford.edu
Organization name Stanford University
Department Orthopaedic Surgery
Lab Bhutani
Street address 300 Pasteur Drive, R164 Edwards Bldg
City Stanford
State/province California
ZIP/Postal code 94305-5641
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (6)
GSM2819565 WT#1_AGTCAA
GSM2819566 WT#2_AGTTCC
GSM2819567 WT#3_ATGTCA
This SubSeries is part of SuperSeries:
GSE105122 TET1 KO affects Sox9 function
Relations
BioProject PRJNA414772
SRA SRP120352

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE105121_RAW.tar 430.0 Kb (http)(custom) TAR (of TXT)
GSE105121_fold_change.csv.gz 166.6 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap