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Series GSE104920 Query DataSets for GSE104920
Status Public on Oct 13, 2017
Title Bone marrow derived macrophage vs peritoneal macrophage
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Immunometabolism is a rapidly growing field, which has led to greater understanding of innate immune cell functions. Macrophages are at the core of this research: polarized subsets of in vitro-derived cells reportedly utilize select metabolic pathways to maintain their phenotype. However, relevance of these in vitro studies to the in vivo setting is not known, and metabolic requirements are likely dependent on unique physiological and cellular metabolic environments. Here we define the metabolic requirements of peritoneal tissue-resident macrophages, the accessibility of these metabolites to cells in the peritoneum, and we dissect the role of this unique environment in maintaining a crucial macrophage function. We find that the peritoneal cavity is enriched in amino acids, most notably glutamate. Peritoneal tissue-resident macrophages have an extraordinarily large mitochondrial capacity compared with other phagocytes; this is primarily fueled by glutaminolysis, which is additionally required to maintain an extensive respiratory burst. Glutaminolysis fuels the electron transport chain, which is enhanced during tissue-resident macrophage respiratory burst via a switch to dependence of mitochondrial complex-II. This is not dependent on the level of NADPH, but requires p47 maintained NADPH-oxidase activity. Therefore, we propose that tissue-resident macrophages exploit their unique metabolic niche by implementing their glutamine-fueled mitochondrial-rich phenotype to sustain respiratory burst to assault pathogens, showing that cell-specific metabolic underpinning is important for function. Importantly, we also find that glutamine is required for the respiratory burst in human monocytes, which highlights that metabolites are not species-specific and can be the link between cellular mechanism in mouse and man.
 
Overall design M-CSF bone marrow derived macrophage (BMDM) (7 days) vs peritoneal tissue-resident macrophage, 2 vs 2 independent samples
 
Contributor(s) Davies LC, McVicar DW
Citation(s) 29234000
Submission date Oct 12, 2017
Last update date May 15, 2019
Contact name Luke Cynlais Davies
E-mail(s) luke.davies@nih.gov
Organization name National Cancer Institute
Department Cancer and Inflammation Program
Lab Leukocyte Signaling Section
Street address 1050 Boyles Street
City Frederick
State/province MARYLAND
ZIP/Postal code 21702
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (4)
GSM2810012 Bone marrow derived macrophage 1
GSM2810013 Bone marrow derived macrophage 2
GSM2810014 Peritoneal tissue-resident macrophage 1
Relations
BioProject PRJNA414129
SRA SRP119876

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SOFT formatted family file(s) SOFTHelp
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Supplementary file Size Download File type/resource
GSE104920_BMDM_vs_Resident_Fold.txt.gz 601.4 Kb (ftp)(http) TXT
GSE104920_BM_vs_Resident_CPM.txt.gz 333.5 Kb (ftp)(http) TXT
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Processed data are available on Series record

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