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Series GSE104882 Query DataSets for GSE104882
Status Public on May 01, 2018
Title Diet-Induced Obesity Leads to Infarct Expansion, increased neuroinflammation, and Worsened Outcomes after Stroke
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We used RNA-seq to show that high-fat-diet-fed mice have a larger neuroinflammatory response following stroke. Elucidating these mechanisms may lead to the development of treatments that will benefit people with obesity who suffer from a stroke.
 
Overall design 145 C57BL/6J mice were either fed a 60% kCal fat diet or 6% kCal fat diet for 6 or 15 weeks. Focal ischemia was induced and brain tissue was harvested for RNA-seq.
 
Contributor(s) Piening B, Peterson T, Buckwalter M
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Submission date Oct 12, 2017
Last update date Jul 25, 2021
Contact name Brian D Piening
E-mail(s) bpiening@stanford.edu
Organization name Stanford
Department Genetics
Lab Snyder
Street address 300 Pasteur Drive
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (26)
GSM2809398 151_41
GSM2809399 152_42
GSM2809400 153_43
Relations
BioProject PRJNA414079
SRA SRP119845

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104882_RAW.tar 3.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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