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Series GSE104785 Query DataSets for GSE104785
Status Public on Dec 07, 2018
Title Salmonella persisters undermine host immune defences during antibiotic treatment
Organisms Mus musculus; Salmonella enterica subsp. enterica serovar Typhimurium
Experiment type Expression profiling by high throughput sequencing
Summary Many bacterial infections are hard to treat and tend to relapse, possibly due to the presence of antibiotic-tolerant persisters that are considered dormant cells when bacteria are grown in laboratory medium. Non-growing persisters also form following uptake of Salmonella by macrophages but their nature is little understood. Here we show that Salmonella persisters arising during macrophage infection maintain an active state. Persisters reprogram macrophages by means of effectors secreted by the SPI-2 Type 3 Secretion System (T3SS), thereby dampening pro-inflammatory innate immune responses and inducing anti-inflammatory macrophage polarisation. Reprogramming allows non-growing Salmonella to survive for extended periods in their host. Persisters undermining the host immune defences might confer an advantage to the pathogen during relapse once the antibiotic pressure is relieved.
 
Overall design Transcriptome profiling of macrophages/Salmonella in distinct subpopulations by dual RNA-Seq
Web link http://science.sciencemag.org/content/362/6419/1156
 
Contributor(s) Hill P, Stapels D
Citation(s) 30523110
Submission date Oct 10, 2017
Last update date May 15, 2019
Contact name Peter Hill
E-mail(s) peter.hill1@imperial.ac.uk
Organization name Imperial College London
Street address Kensington
City London
ZIP/Postal code SW7 2AZ
Country United Kingdom
 
Platforms (3)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21220 Illumina NextSeq 500 (Salmonella enterica subsp. enterica serovar Typhimurium)
GPL24107 Illumina NextSeq 500 (Mus musculus; Salmonella enterica subsp. enterica serovar Typhimurium)
Samples (18)
GSM2807855 Uninfected BMM Rep 1
GSM2807856 Uninfected BMM Rep 2
GSM2807857 Uninfected BMM Rep 3
Relations
BioProject PRJNA413814
SRA SRP119688

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104785_Mouse_GeneCounts.txt.gz 700.3 Kb (ftp)(http) TXT
GSE104785_Salmonella_GeneCounts.txt.gz 89.0 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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