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Series GSE104569 Query DataSets for GSE104569
Status Public on Nov 21, 2017
Title Elevated p53 Activaties Restrict Differentiation Potential of microRNA-deficient Pluripotent Stem Cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary Pluripotent stem cells (PSCs) deficient for microRNAs (miRNAs), such as Dgcr8-/- or Dicer-/- embryonic stem cells (ESCs), contain no mature miRNA and cannot differentiate into somatic cells. How miRNA deficiency causes differentiation defects remains poorly understood. Here, we report that miR-302 is sufficient to enable neural differentiation of differentiation-incompetent Dgcr8-/- ESCs. Our data showed that miR-302 directly suppresses the tumor suppressor p53, which is modestly upregulated in Dgcr8-/- ESCs and serves as a barrier restricting neural differentiation. We demonstrated that direct inactivation of p53 by SV40 large T antigen, a short hairpin RNA against Trp53, or genetic ablation of Trp53 in Dgcr8-/- PSCs enables neural differentiation, while activation of p53 by the MDM2 inhibitor nutlin-3a in wild-type ESCs inhibits neural differentiation. Together, we demonstrate that a major function of miRNAs in neural differentiation is suppression of p53 and that modest activation of p53 blocks neural differentiation of miRNA-deficient PSCs.
 
Overall design Total RNAs extracted from three independent biological samples of Dgcr8-/--shctrl or Dgcr8-/--302 ESCs were submitted for microarray analysis
 
Contributor(s) Zhao R
Citation(s) 29141234
Submission date Oct 03, 2017
Last update date Jul 25, 2021
Contact name Hu Li
E-mail(s) li.hu@mayo.edu
Organization name Mayo Clinic
Department Molecular Pharmacology & Experimental Therapeutics
Lab Systems Biology and Pharmacology
Street address 200 First Street, Gonda Building G19-408
City Rochester
State/province MN
ZIP/Postal code 55904
Country USA
 
Platforms (1)
GPL16570 [MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version]
Samples (6)
GSM2803474 Dgcr8-/--shctrl_sample_1
GSM2803475 Dgcr8-/--shctrl_sample_2
GSM2803476 Dgcr8-/--shctrl_sample_3
Relations
BioProject PRJNA413063

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104569_RAW.tar 55.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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