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Series GSE104365 Query DataSets for GSE104365
Status Public on Sep 29, 2017
Title Notch1 haploinsufficiency causes aortic aneurysms in mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Ascending aortic aneurysms (AscAA) are a life-threatening disease whose molecular basis is poorly understood. Mutations in NOTCH1 have been linked to bicuspid aortic valve (BAV), which is associated with AscAA. Here, we describe a novel role for Notch1 in AscAA. We found that Notch1 haploinsufficiency exacerbated the aneurysmal aortic root dilation seen in the Marfan syndrome mouse model and that heterozygous deletion of Notch1 in the second heart field (SHF) lineage recapitulated this exacerbated phenotype. Lineage tracing analysis showed that loss of Notch1 in the SHF reduces the number of SHF-derived smooth muscle cells in the aortic root, and RNA-seq analysis demonstrated distinct in vivo expression patterns between lineage-specific regions of the ascending aorta. Finally, Notch1+/- mice in a predominantly 129S6 background develop aortic root dilation, indicating that loss of Notch1 independently predisposes to AscAA. These findings are the first to demonstrate a SHF lineage-specific role for Notch1 in AscAA and suggest that genes linked to the development of BAV may also contribute to the associated aortopathy.
 
Overall design To determine why dilation was localized to the aortic root in Notch1.129S6+/- mice, RNA-sequencing was performed on proximal and distal ascending aortic tissue from Notch1.129S6+/- mice and wildtype littermates at 2 months of age. Transcriptome analysis was utilized to better understand why the dilation was localized to the aortic root. Hierarchical cluster analysis grouped these samples based on location first and then genotype, and showed that cells of the proximal and distal ascending aorta have distinct gene expression patterns in vivo.
 
Contributor(s) Koenig SN, LaHaye S, Feller JD, LaHaye S, Rowland P, Hor KN, Trask AJ, Janssen PM, Radtke F, Lilly B, Garg V
Citation(s) 29093270
Submission date Sep 28, 2017
Last update date May 15, 2019
Contact name Vidu Garg
E-mail(s) vidu.garg@nationwidechildrens.org
Phone 614-355-5710
Organization name Research Institute at Nationwide Children's Hospital
Department Cardiovascular Research
Lab Vidu Garg
Street address 700 Children's Drive WB4239
City Columbus
State/province OH
ZIP/Postal code 43205
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (12)
GSM2796083 Notch1_proximal_aorta_1
GSM2796084 Notch1_proximal_aorta_2
GSM2796085 Notch1_proximal_aorta_3
Relations
BioProject PRJNA412455
SRA SRP119033

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE104365_2016-05-04_Koenig_mRNA-Seq_Gene-Level_Results.xlsx.gz 21.1 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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