|
| Status |
Public on Jan 01, 2018 |
| Title |
Targeted RNA-Seq of Human Lymphoma Cell Line |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Thirty-seven (37) human cell lines were submitted to HTG Molecular for analysis using the HTG EdgeSeq Oncology Biomarker Panel. The goal of this work is to characterize the gene expression pattern of different cell lines bearing sensitivity or resistance for specific drugs.
|
| |
|
| Overall design |
Cell lines were deep sequenced on an Illumina NextSeq using High Output, PhiX was spiked into the library at 5%.
|
| |
|
| Contributor(s) |
Bertoni F, Tarantelli C, Gaudio E, Cascione L |
| Citation(s) |
34751409 |
| |
| Submission date |
Sep 17, 2017 |
| Last update date |
Dec 07, 2021 |
| Contact name |
Francesco Bertoni |
| E-mail(s) |
francesco.bertoni@ior.usi.ch
|
| Phone |
+41 91 820 0367
|
| Organization name |
IOR
|
| Department |
Lymphoma & Genomics Research Program
|
| Street address |
Via V. Vela 6
|
| City |
Bellinzona |
| State/province |
Ticino |
| ZIP/Postal code |
6500 |
| Country |
Switzerland |
| |
|
| Platforms (1) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
|
| Samples (36)
|
|
| Relations |
| BioProject |
PRJNA407679 |
| SRA |
SRP117809 |
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