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| Status |
Public on May 24, 2019 |
| Title |
Gene expression profile (RNAseq) of wild-type and Zeb1 (+/-) peritoneal mouse macrophages |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Purpose: Characterize the gene expression profile of wild-type and Zeb1 (+/-) peritoneal mouse macrophages through RNA sequencing
Methods: RNA sequencing of RNA from peritoneal macrophages isolated by peritoneal lavage and FACS sorting (F4/80+ CD11b+) from wild-type and Zeb1 (+/-) mice (2 mice pooled for each sample/set)
Results: Wild-type and Zeb1 (+/-) peritoneal mouse macrophages display differential gene expression. Zeb1 (+/-) peritoneal macrophages express lower levels of SPM (F4/80low)-associated genes
Conclusions: Wild-type and Zeb1 (+/-) peritoneal mouse macrophages display differential gene expression. Zeb1 (+/-) peritoneal macrophages express lower levels of SPM (F4/80low)-associated genes
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| Overall design |
RNA sequencing of RNA from peritoneal macrophages isolated by peritoneal lavage and FACS sorting (F4/80+ CD11b+) from wild-type and Zeb1 (+/-) mice (2 mice pooled for each sample)
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| Contributor(s) |
Cortes M, Esteve-Codina A, Postigo A |
| Citation(s) |
29038174 |
| |
| Submission date |
Sep 13, 2017 |
| Last update date |
May 24, 2019 |
| Contact name |
Antonio Postigo |
| Organization name |
IDIBAPS/ICREA
|
| Lab |
Group of Regulation of Gene Expression in Cell Differentiation and Cancer
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| Street address |
Casanova 143. Cellex 1B
|
| City |
Barcelona |
| State/province |
BARCELONA |
| ZIP/Postal code |
08036 |
| Country |
Spain |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA407798 |
| SRA |
SRP117949 |
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