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Series GSE103492 Query DataSets for GSE103492
Status Public on Nov 07, 2017
Title Transcriptome analysis of Wnt3a-treated Wild Type, Lrp5KO , Lrp6KO and Lrp5/6KO osteoblasts
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Wnt signaling is a major regulator of osteoblast differentiation and function. To investigate how Wnt3a signaling regulates osteoblastic gene expression and to identify the role of Lrp5 and Lrp6 in mediating Wnt3a signaling in osteoblasts, neonatal calvarial osteoblasts isolated from C57Bl6 (WT) and osteoblasts lacking Lrp5 (Lrp5KO), Lrp6 (Lrp6KO) and, both Lrp5 and 6 (Lrp5/6KO) were treated with Wnt3a for 24 hours and gene expression changes were quantified by RNA-seq.
 
Overall design Transcriptome analysis to identify Wnt3a regulated genes in Wild Type, Lrp5KO , Lrp6KO and Lrp5/6KO osteoblasts
 
Contributor(s) Sebastian A, Loots GG
Citation(s) 29176883
Submission date Sep 05, 2017
Last update date May 15, 2019
Contact name Aimy Sebastian
E-mail(s) asebastian2@ucmerced.edu
Organization name Lawrence Livermore National Laboratory
Street address 7000 East Ave
City Livermore
ZIP/Postal code 94550
Country USA
 
Platforms (2)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL21626 NextSeq 550 (Mus musculus)
Samples (52)
GSM2772392 WT rep1
GSM2772393 WT rep2
GSM2772394 WT rep3
Relations
BioProject PRJNA401759
SRA SRP116923

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103492_Lrp5KO_Wnt3a.txt.gz 1.5 Mb (ftp)(http) TXT
GSE103492_Lrp5_6KO_Wnt3a.txt.gz 1.0 Mb (ftp)(http) TXT
GSE103492_Lrp6KO_Wnt3a.txt.gz 1018.9 Kb (ftp)(http) TXT
GSE103492_WT_Wnt3a.txt.gz 935.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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