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Series GSE103386 Query DataSets for GSE103386
Status Public on Nov 14, 2018
Title Impact of Ezh2 deficiency on differentiation of follicular helper T (Tfh) cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Comparison of transcriptome between control and Ezh2-deficient follicular helper T cells
 
Overall design Control mice or those are deficient for Ezh2 (deleted by CD4-Cre) were infected with vaccinia virus. Eight days later, CD44-high, CD62L-negative CD4+ T cells were further stained, and CXCR5+, SLAM-low follicular helper T cells were sorted cells and used for RNAseq analysis.
 
Contributor(s) Xue H, Peng W
Citation(s) 30575739
Submission date Sep 01, 2017
Last update date Jul 25, 2021
Contact name Weiqun Peng
E-mail(s) wpeng@gwu.edu
Organization name The George Washington University
Street address 1918 F Street, NW , DC
City Washington
State/province DC
ZIP/Postal code 20052
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (4)
GSM2769715 Day8 WT Tfh rep1
GSM2769716 Day8 WT Tfh rep2
GSM2769717 Day8 Ezh2-deficient Tfh rep1
This SubSeries is part of SuperSeries:
GSE103387 Regulation of Tfh response by Ezh2
Relations
BioProject PRJNA401838
SRA SRP131339

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103386_RAW.tar 62.5 Mb (http)(custom) TAR (of WIG)
GSE103386_Tfh_FPKM.xls.gz 978.6 Kb (ftp)(http) XLS
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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