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Series GSE103377 Query DataSets for GSE103377
Status Public on Jun 15, 2018
Title Hippocampus transcriptome analysis of CHD8 Asn2373LysfsX2 heterozygote mutation mice age of P25
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary CHD8, encoding a chromatin remodeling protein, is one of the most frequently mutated genes in autism spectrum disorders. However, how such mutations cause autistic behaviors remain unclear. In mice carrying a heterozygous frame-shift mutation in the Chd8 gene (Asn2373LysfsX2) identified in autistic human individuals, we observed autistic-like behaviors that are much stronger in males than in females, similar to human cases. These behaviors included enhanced mother-seeking ultrasonic vocalizations in pups, mother-attachment behaviors in juveniles, and isolation-induced self-grooming in adults. These behaviors were associated with opposite changes in synaptic excitation/inhibition and neuronal firing in male and female mice, but with strong changes in gene expression in female mice. Therefore, this CHD8 mutation may cause male-preponderant autistic-like behaviors in mice through differential synaptic/neuronal changes and gene expression
 
Overall design Hippocampus transcriptome of WT and CHD8 Asn2373LysfsX2 heterozygote mutant mice age of P25 in both sex.
 
Contributor(s) Kim E, Jung H, Kang H
Citation(s) 30104731
Submission date Sep 01, 2017
Last update date May 15, 2019
Contact name Eunjoon Kim
E-mail(s) kime@kaist.ac.kr
Phone 82-42-350-2633
Organization name IBS/KAIST
Department Center for Synaptic Brain Dysfunctions/Department of Biological Sciences
Street address Kuseong-dong
City Daejeon
ZIP/Postal code 305-701
Country South Korea
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (12)
GSM2769645 WT male hippocampus 1
GSM2769646 WT male hippocampus 2
GSM2769647 WT male hippocampus 3
This SubSeries is part of SuperSeries:
GSE87370 Comparison of DEG between neonatal male and female mice by CHD8 Asn2373LysfsX2 heterozygote mutation
Relations
BioProject PRJNA401711
SRA SRP131336

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Supplementary file Size Download File type/resource
GSE103377_processed_data_DESeq_count.txt.gz 1.7 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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