|
| Status |
Public on Dec 08, 2017 |
| Title |
RNAseq in control and shQk KD mouse neural stem cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We sequenced mRNA from mouse primary cultured neural stem cells infected with control or shQk lentivirus to compare gene expression level and alternative splicing events between 3 control and 3 shQk.
|
| |
|
| Overall design |
mRNA profiles obtained from 3 different control and 3 shQk treated neural stem cells were generated by deep sequencing using Illumina Hiseq2500.
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| |
|
| Contributor(s) |
Hayakawa-Yano Y, Okano H, Yano M |
| Citation(s) |
29021239, 30813567 |
| |
| Submission date |
Aug 29, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Masato Yano |
| E-mail(s) |
myano@med.niigata-u.ac.jp
|
| Organization name |
Niigata University
|
| Department |
Division of Neurobiology and Anatomy
|
| Street address |
757, Ichibancho, Asahimachidori, Chuo-ku, Niigata-shi,
|
| City |
Niigata |
| ZIP/Postal code |
950-0907 |
| Country |
Japan |
| |
|
| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE103248 |
RNAseq in control and shQk KD mouse neural stem cells, and Qki5 CLIP in E14.5 mouse brain |
|
| Relations |
| BioProject |
PRJNA400617 |
| SRA |
SRP116547 |
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