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Series GSE103186 Query DataSets for GSE103186
Status Public on Jan 09, 2018
Title Genomic and Epigenomic Profiling of High-Risk Intestinal Metaplasia Reveals Molecular Determinants of Gastric Cancer Progression
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Metaplasia of the gastric epithelia (intestinal metaplasia, IM) is a pre-malignant lesion associated with increased gastric cancer (GC) risk.
 
Overall design Bisulphite converted DNA from the 191 samples were hybridised to the Illumina Infinium Human Methylation 450K Beadchip
 
Contributor(s) Huang K, Patrick T
Citation(s) 29290541
https://doi.org/10.1016/j.ebiom.2023.104844
Submission date Aug 28, 2017
Last update date Oct 31, 2023
Contact name Kie Kyon Huang
E-mail(s) kiekyon.huang@gmail.com
Organization name Duke-NUS Graduate Medical School
Street address 8 College Road
City Singapore
State/province Select State/Province
ZIP/Postal code 169857
Country Singapore
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (191)
GSM2756770 genomic DNA from gastric intestinal metaplasia 1
GSM2756771 genomic DNA from gastric intestinal metaplasia 2
GSM2756772 genomic DNA from gastric intestinal metaplasia 3
Relations
BioProject PRJNA400467

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103186_RAW.tar 1.7 Gb (http)(custom) TAR (of IDAT)
Processed data included within Sample table
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