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Series GSE103148 Query DataSets for GSE103148
Status Public on Aug 07, 2019
Title Genome wide SMC1-mediated chromatin looping changes in TAE sensitive and resistant Kelly cells
Organism Homo sapiens
Experiment type Other
Summary We performed SMC1-mediated ChIA-PET analysis in both TAE sensitive and resistant Kelly cells.
 
Overall design SMC1 ChIA-PET data from TAE sensitive and resistant Kelly cells were generated by deep sequencing using Illumina HiSeq 2000.
 
Contributor(s) Day D, Dries R, Debruyne D, George R
Citation(s) 31391581
Submission date Aug 27, 2017
Last update date Jul 25, 2021
Contact name Ruben Dries
E-mail(s) rubendries@gmail.com
Organization name DFCI
Department Computational Biology
Lab Longwood Center
Street address 360 Longwood Ave
City Boston
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM2756146 Kelly-Res-SMC1
GSM2756147 Kelly-SMC1
This SubSeries is part of SuperSeries:
GSE103084 TAE sensitive and resistant Kelly cells
Relations
BioProject PRJNA400340
SRA SRP116274

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103148_RAW.tar 18.7 Mb (http)(custom) TAR (of BEDPE)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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