|
| Status |
Public on Aug 19, 2017 |
| Title |
RNA-seq of FSHD and control immortalised myoblasts I |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
FSHD and control immortalised myoblasts show repression of Pax7 target genes
|
| |
|
| Overall design |
FSHD Myoblasts 54-2, 54-12, 54-A5, 16A and 12A and matched controls 54-6, 54-A10, 16U and 12U were plated at 312,000 cells per 12 well plate in proliferation media and cultured for 48 hours or until 100% confluent. RNA-sequencing was performed on high quality (RIN > 8.0) DNA free RNA.
|
| |
|
| Contributor(s) |
Banerji CR, Zammit PS |
| Citation(s) |
29255294, 32242220 |
| |
| Submission date |
Aug 18, 2017 |
| Last update date |
Aug 24, 2020 |
| Contact name |
Christopher Raja Socrates Banerji |
| E-mail(s) |
cb4115@ic.ac.uk
|
| Organization name |
King's College London
|
| Department |
Randall Division of Cell and Molecular Biophysics
|
| Lab |
Zammit Lab
|
| Street address |
New Hunts House
|
| City |
London |
| ZIP/Postal code |
SE1 1UL |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (27)
|
|
| Relations |
| BioProject |
PRJNA399103 |
| SRA |
SRP115815 |
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