|
| Status |
Public on Jun 04, 2018 |
| Title |
The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes |
| Organisms |
Drosophila ananassae; Drosophila erecta; Drosophila melanogaster; Drosophila mojavensis; Drosophila persimilis; Drosophila pseudoobscura; Drosophila sechellia; Drosophila simulans; Drosophila virilis; Drosophila yakuba; Drosophila willistoni; Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
29867222 |
| |
| Submission date |
Aug 09, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Jelle Jacobs |
| E-mail(s) |
jelle.jacobs9255@gmail.com
|
| Organization name |
Institute of molecular Pathology
|
| Department |
VBC
|
| Lab |
Stark lab
|
| Street address |
Campus-Vienna-Biocenter 1
|
| City |
Vienna |
| ZIP/Postal code |
1030 |
| Country |
Austria |
| |
|
| Platforms (15)
|
| GPL13304 |
Illumina HiSeq 2000 (Drosophila melanogaster) |
| GPL13306 |
Illumina HiSeq 2000 (Drosophila simulans) |
| GPL13307 |
Illumina HiSeq 2000 (Drosophila yakuba) |
| GPL13309 |
Illumina HiSeq 2000 (Drosophila ananassae) |
| GPL13310 |
Illumina HiSeq 2000 (Drosophila pseudoobscura) |
| GPL13311 |
Illumina HiSeq 2000 (Drosophila mojavensis) |
| GPL13313 |
Illumina HiSeq 2000 (Drosophila virilis) |
| GPL14359 |
Illumina HiSeq 2000 (Drosophila willistoni) |
| GPL19132 |
Illumina NextSeq 500 (Drosophila melanogaster) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
| GPL21306 |
Illumina HiSeq 4000 (Drosophila melanogaster) |
| GPL23883 |
Illumina NextSeq 500 (Drosophila erecta) |
| GPL23884 |
Illumina NextSeq 500 (Drosophila persimilis) |
| GPL23885 |
Illumina NextSeq 500 (Drosophila pseudoobscura) |
| GPL23886 |
Illumina NextSeq 500 (Drosophila sechellia) |
|
| Samples (175)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE101827 |
The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [ATAC-seq] |
| GSE102439 |
The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [evolutionary study] |
| GSE102544 |
The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [scATAC-seq] |
| GSE108019 |
The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [ATAC-seq Grh mutants and Human GRHL] |
|
| Relations |
| BioProject |
PRJNA397746 |
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