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Series GSE102377 Query DataSets for GSE102377
Status Public on Dec 26, 2018
Title Metastasis in triple negative breast cancer is dependent on ΔNp63/CXCL2/CCL22-mediated recruitment of myeloid-derived suppressor cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Gene expression analysis of the knockdown of ΔNP63 in two different human breast cancer cell lines using RNA-Seq
 
Overall design RNA was collected and analyzed for biological replicates of each condition (shΔNP63 vs Vector) from two different human breast cancer cell lines (HCC1806 and SUM1315)
 
Contributor(s) Kumar S, Wilkes D, Samuel N, Nayak A, Alicea-Torres K, Gluck C, Sinha S, Gabrilovich D, Chakrabarti R
Citation(s) 30295647, 38510127
Submission date Aug 08, 2017
Last update date Apr 02, 2024
Contact name Rumela Chakrabarti
E-mail(s) rumela@vet.upenn.edu
Phone 215-746-1873
Organization name University of Pennsylvania School of Veterinary Medicine
Department Department of Biomedical Sciences
Street address 380 S University Ave, 411 Hill Pavilion
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (6)
GSM2735676 HCC1806RR_DN_Rep1
GSM2735677 HCC1806RR_Vec_Rep1
GSM2735678 HCC1806RR_Vec_Rep2
Relations
BioProject PRJNA397593
SRA SRP115049

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102377_HCC1806RR_SUM1315_TPM_Table.txt.gz 1.5 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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