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Series GSE102368 Query DataSets for GSE102368
Status Public on May 01, 2018
Title RNA-seq of MMTV-Neu AXL KO tumors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary AXL is activated by its ligand GAS6 and is expressed in triple-negative breast cancer cells. We report that AXL is also detected in HER2+ breast cancer specimens where its expression correlates with poor patients’ survival. Using murine models of HER2+ breast cancer, AXL, but not Gas6, was found essential for metastasis. We determined that AXL is required for intravasation, extravasation and growth at the metastatic site. AXL is expressed in HER2+ cancers displaying EMT signatures and contributes to sustain EMT in murine tumors. Interfering with AXL in patient-derived xenograft impaired TGF-β-induced cell invasion. Lastly, pharmacological inhibition of AXL decreased the metastatic burden of mice developing HER2+ breast cancer. Our data identify AXL as a potential co-therapeutic target during the treatment of HER2+ breast cancers to limit metastasis.
 
Overall design Differential gene expression profile between MMTV-Neu tumors of AXL-/- and AXL+/+ by RNA sequencing (Illumina HiSEq 2000)
 
Contributor(s) Côté J, Goyette M
Citation(s) 29719259
Submission date Aug 08, 2017
Last update date Jul 25, 2021
Contact name Marie-Anne Goyette
Organization name IRCM
Street address 110 av. Des Pins Ouest
City Montreal
ZIP/Postal code H2W 1R7
Country Canada
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (4)
GSM2735587 WT1 (tumor)
GSM2735588 WT2 (tumor)
GSM2735589 AXL KO1 (tumor)
This SubSeries is part of SuperSeries:
GSE102370 The Receptor Tyrosine Kinase AXL is Required at Multiple Steps of the Metastatic Cascade during HER2-positive Breast Cancer Progression
Relations
BioProject PRJNA397625
SRA SRP115117

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102368_RAW.tar 580.0 Kb (http)(custom) TAR (of TXT)
GSE102368_deseq_differential_expression_results.xlsx 5.0 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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