NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE101859 Query DataSets for GSE101859
Status Public on Jul 26, 2017
Title The RhoJ-BAD Signaling Network: An Achilles Heel for BRAF Mutant Melanomas
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Genes and pathways that allow cells to cope with oncogene-induced stress represent selective cancer therapeutic targets that remain largely undiscovered. In this study, we identify a RhoJ signaling pathway that is a selective therapeutic target for BRAF mutant cells. RhoJ deletion in BRAF mutant melanocytes modulates the expression of the pro-apoptotic protein BAD as well as genes involved in cellular metabolism, impairing nevus formation, cellular transformation, and metastasis. Short-term treatment of nascent melanoma tumors with PAK inhibitors that block RhoJ signaling halts the growth of BRAF mutant melanoma tumors in vivo and induces apoptosis in melanoma cells in vitro via a BAD-dependent mechanism. As up to 50% of BRAF mutant human melanomas express high levels of RhoJ, these studies nominate the RhoJ-BAD signaling network as a therapeutic vulnerability for fledgling BRAF mutant human tumors.
 
Overall design 5 Braf CA/+; Pten fl/+; Cre +; RhoJ +/+ melanoma tumors from mice were compared to 5 Braf CA/+; Pten fl/+; Cre +; RhoJ -/- melanoma tumors. Standard RNA isolation progocols were used.
 
Contributor(s) Ruiz R, Ganesan A
Citation(s) 28753606
Submission date Jul 25, 2017
Last update date May 15, 2019
Contact name Anand Ganesan
E-mail(s) aganesan@uci.edu
Phone (949) 824-2926
Organization name University of California, Irvine
Department Dermatology
Street address 836 Health Science Rd
City Irvine
State/province CA
ZIP/Postal code 92697
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (10)
GSM2717318 RhoJ WT rep 1
GSM2717319 RhoJ WT rep 2
GSM2717320 RhoJ WT rep 3
Relations
BioProject PRJNA395724
SRA SRP113541

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101859_sorted_genelist.csv.gz 2.0 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap