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| Status |
Public on Aug 06, 2019 |
| Title |
Expression profiling of lncRNA and mRNA in Hepatocellular carcinoma |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Non-coding RNA profiling by array
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| Summary |
To explore critical roles of lncRNA and mRNA playing in the pathogenesis of hepatocellular carcinoma, the Agilent microarray was used to simultaneously profile lncRNA and mRNA expression in 7 pairs of HCC and matched adjacent tumor-free tissues.
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| Overall design |
In total, seven pairs of HCC and matched adjacent tumor-free tissues were collected during the surgery from HCC patients admitted to Zhongshan Hospital of Fudan University between 2008 and 2009.
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| Contributor(s) |
Zhu H, Yu X, Zhang G, Shi X, Bilegsaikhan E, Guo H, Liu T, Dong L, Weng S, Shen X, Zhu J |
| Citation(s) |
31485608 |
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| Submission date |
Jul 21, 2017 |
| Last update date |
Jul 25, 2021 |
| Contact name |
Ji-Min Zhu |
| E-mail(s) |
zhu.jimin@zs-hospital.sh.cn
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| Organization name |
Zhongshan Hospital of Fudan University
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| Street address |
180 Fenglin Road, Shanghai, China
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| City |
Shanghai |
| ZIP/Postal code |
200032 |
| Country |
China |
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| Platforms (1) |
| GPL21047 |
Agilent-074348 Human LncRNA v6 4X180K [Probe Name Version] |
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| Samples (14)
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| GSM2714128 |
HumanLiver, tumor adjacent tissue [s5P_NS] |
| GSM2714129 |
HumanLiver, tumor tissue [s5T_NS] |
| GSM2714130 |
HumanLiver, tumor adjacent tissue [s6P_NS] |
| GSM2714131 |
HumanLiver, tumor tissue [s6T_NS] |
| GSM2714132 |
HumanLiver, tumor adjacent tissue [s9P_NS] |
| GSM2714133 |
HumanLiver, tumor tissue [s9T_NS] |
| GSM2714134 |
HumanLiver, tumor adjacent tissue [s10P_NS] |
| GSM2714135 |
HumanLiver, tumor tissue [s10T_NS] |
| GSM2714136 |
HumanLiver, tumor adjacent tissue [s11P_NS] |
| GSM2714137 |
HumanLiver, tumor tissue [s11T_NS] |
| GSM2714138 |
HumanLiver, tumor adjacent tissue [s13P_NS] |
| GSM2714139 |
HumanLiver, tumor tissue [s13T_NS] |
| GSM2714140 |
HumanLiver, tumor adjacent tissue [s19P_NS] |
| GSM2714141 |
HumanLiver, tumor tissue [s19T_NS] |
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| Relations |
| BioProject |
PRJNA395308 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE101728_RAW.tar |
351.6 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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