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Series GSE101527 Query DataSets for GSE101527
Status Public on Oct 25, 2017
Title Reversing SKIā€“SMAD4-mediated suppression is essential for TH17 cell differentiation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Disruption of Ski/Smad4 license Th17 differentiation. TGF-b-Ski-Smad4-RORgt-Th17 axis
 
Overall design Examination of transcriptome under two different conditions (WT vs.Smad4 KO), two different treatment (Th0 and IL6) and three time point( 0hr, 3hr and 12hr)
 
Contributor(s) Zhang S, Xu X, Wan Y
Citation(s) 29072299
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 AI123193 Functional protein networks underlying T cell growth, proliferation and differentiation UNIVERSITY OF NORTH CAROLINA AT CHAPEL HILL Yisong Wan
Submission date Jul 17, 2017
Last update date May 15, 2019
Contact name Yisong Wan
Organization name University of North Carolina-Chapel Hill
Department Lineberger Comprehensive Cancer Center
Lab Marsico Hall Rm 5229J
Street address 125 Mason Farm Road
City Chapel Hill
State/province NC
ZIP/Postal code 27599
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (12)
GSM2705538 WT 3hr IL6SB 1
GSM2705539 WT 3hr IL6SB 2
GSM2705540 WT 3hr IL6SB 3
Relations
BioProject PRJNA394763
SRA SRP112617

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101527_Smad4_Featurecount_STAR_DESeq_exp_log2_normalized_IL6.xlsx 3.0 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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