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Series GSE101339 Query DataSets for GSE101339
Status Public on Jul 13, 2017
Title Spo11-oligo mapping of DSBs in an SK1 x S288C F1 hybrid strain
Organism Saccharomyces cerevisiae
Experiment type Other
Summary The Spo11-generated double-strand breaks (DSBs) that initiate meiotic recombination are non-randomly distributed across the genome. Here, we use Spo11-oligonucleotide complexes, a byproduct of DSB formation, to map the distribution of meiotic DSBs in an SK1 x S88C F1 hybrid strain of Saccharomyces cerevisiae.
 
Overall design One sample, collected at 6 hr after transfer to sporulation medium
Web link https://www.biorxiv.org/content/early/2017/07/28/169870
 
Contributor(s) Zhu X, Keeney S
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NIH grant(s)
Grant ID Grant title Affiliation Name
R01 GM058673 Mechanism of meiotic recombination in yeast Sloan Kettering Institute for Cancer Research Scott Keeney
R35 GM118092 Mechanism and regulation of meiotic recombination Sloan Kettering Institute for Cancer Research Scott Keeney
Submission date Jul 12, 2017
Last update date Jul 25, 2021
Contact name Scott Keeney
E-mail(s) s-keeney@ski.mskcc.org
Phone (212) 639-5182
Organization name Memorial Sloan Kettering Cancer Center
Department Molecular Biology Program
Lab Keeney lab
Street address 1275 York Ave
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL17342 Illumina HiSeq 2500 (Saccharomyces cerevisiae)
Samples (1)
GSM2701530 SK1 x S288C 6h sample
Relations
BioProject PRJNA394003
SRA SRP111730

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101339_RAW.tar 2.2 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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