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Series GSE100449 Query DataSets for GSE100449
Status Public on Apr 04, 2018
Title Dissociable structural and functional hippocampal outputs via distinct subiculum cell classes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Here, we profile gene expression from subiculum pyramidal cells in the mouse.
 
Overall design RNA-seq was performed in bulk (3 biological replicates/sample) and single cell (96 cells/plate x 4 plates) resolution, with deep sequencing on Illumina HiSeq 2500
 
Contributor(s) Cembrowski MS, Spruston N
Citation(s) 29681453
Submission date Jun 25, 2017
Last update date May 15, 2019
Contact name Mark Steven Cembrowski
Organization name University of British Columbia
Department Cellular and Physiological Sciences
Lab Cembrowski
Street address 2350 Health Sciences Mall
City Vancouver
State/province BC
ZIP/Postal code V6S0B7
Country Canada
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (20)
GSM2683238 na_1
GSM2683239 na_2
GSM2683240 na_3
Relations
BioProject PRJNA391825
SRA SRP110477

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE100449_gene_exp.diff.gz 7.0 Mb (ftp)(http) DIFF
GSE100449_genes.fpkm_tracking.gz 1.8 Mb (ftp)(http) FPKM_TRACKING
GSE100449_genes.read_group_tracking.txt.gz 3.4 Mb (ftp)(http) TXT
GSE100449_scQuant.txt.gz 3.0 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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