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Series GSE100403 Query DataSets for GSE100403
Status Public on May 17, 2018
Title A kinome-wide high-content siRNA screen identifies MEK5-ERK5 signaling as critical for breast cancer cell EMT and metastasis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We have employed a high-content microscopy screen in combination with a kinome and phosphatome-wide siRNA library to identify signaling pathways underlying an EMT of murine mammary epithelial cells and breast cancer cells. This screen identified the MEK5-ERK5 axis as a critical player in TGFb-mediated EMT. Suppression of MEK5-ERK5 signaling completely prevented the morphological and molecular changes occurring during a TGFb-induced EMT and, conversely, forced highly metastatic breast cancer cells into a differentiated epithelial state. Inhibition of MEK5-ERK5 signaling also repressed breast cancer cell migration and invasion and substantially reduced lung metastasis without affecting primary tumor growth. The results suggest that the MEK5-ERK5 signaling axis plays an important role in the induction and maintenance of breast cancer cell migration and invasion and thus represents an exploitable target for the pharmacological inhibition of cancer cell metastasis.
 
Overall design We performed RNA-sequencing of 3 replicates of 2 different cell lines and 2 replicates of another cell line
 
Contributor(s) Pavan S, Meyer-Schaller N, Kalathur RK, Saxena M, Christofori G
Citation(s) 29713055
Submission date Jun 23, 2017
Last update date Jul 25, 2021
Contact name Ravi Kiran Reddy KALATHUR
E-mail(s) ravikiran.k@gmail.com
Organization name University of Basel
Department Departement Biomedizin
Street address Mattenstrasse 28
City Basel
State/province Basel
ZIP/Postal code 4058
Country Switzerland
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (8)
GSM2680357 4T1_shCTRL_1
GSM2680358 4T1_shCTRL_2
GSM2680359 4T1_shCTRL_3
Relations
BioProject PRJNA391573
SRA SRP110236

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE100403_RAW.tar 1.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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