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Series GSE100260 Query DataSets for GSE100260
Status Public on Jun 19, 2020
Title Transcriptomic Characterization of LIPA+/+ and LIPA-/- iPSC-derived Macrophages
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Using RNA-Seq, we examined the transcriptome profiles of human iPSC-derived macrophage (IPSDM) with knockout of the LIPA gene by CRISPR/Cas9 gene editing technologies.
 
Overall design LIPA+/+ and LIPA-/- IPSDM were sequenced by Illumina HiSeq 2500 with poly-A selection
 
Contributor(s) Zhang H, Xue C
Citation(s) 28882870
Submission date Jun 20, 2017
Last update date Jun 19, 2020
Contact name Chenyi Xue
Organization name Columbia University
Street address 630 W 168th St.
City New York
State/province NY
ZIP/Postal code 10032
Country USA
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM2676345 LIPA-/- 1-1
GSM2676346 LIPA-/- 1-2
GSM2676347 LIPA+/+ 1-1
Relations
BioProject PRJNA391170
SRA SRP109815

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE100260_control_LIPA_KO_FPKM.tsv.gz 414.9 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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