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Series GSE100204 Query DataSets for GSE100204
Status Public on Sep 05, 2018
Title Minipuberty and Thymic Sexual Dimorphism in the Infant Human Thymus [puberty miRNA]
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary AIRE expression in thymus is downregulated by estrogen after puberty, what probably renders women more susceptible to autoimmune disorders. Here we investigated the effects of minipuberty on male and female infant human thymic tissue in order to verify if this initial transient increase in sex hormones - along the first six months of life - could affect thymic transcriptional network regulation and AIRE expression. Gene co-expression network analysis for differentially expressed genes and miRNA-target analysis revealed sex differences in thymic tissue during minipuberty, but such sex differences were not detected in thymic tissues from donors aged 7-18 moths of age, the non-puberty group. AIRE expression was essentially the same in both sexes in minipuberty and in non-puberty groups, as assessed by genomic and immunohistochemical assays. However, AIRE-interactors networks showed several differences in all groups regarding gene-gene expression correlation. Therefore, minipuberty and genomic mechanisms interact in shaping thymic sexual dimorphism along the first six moths of life.
 
Overall design Thymus miRNA transcriptomic profiles of patients undergoing minipuberty (aged up to 6 months) comparing male versus female infants in order to identify differentially expressed transcripts.
 
Contributor(s) Moreira-Filho CA, Bando SY, Bertonha FB, Ferreira LR, Vinhas CF, Oliveira LH, Zerbini MC, Furlanetto G, Chacur P, Coutinho A, Carneiro-Sampaio M
Citation(s) 30177771
Submission date Jun 19, 2017
Last update date Jul 25, 2021
Contact name Carlos Alberto Moreira-Filho
E-mail(s) carlos.moreira@hc.fm.usp.br
Phone 55-11-3061-8449
Organization name Faculdade de Medicina da Universidade de Sao Paulo
Department Departments of Pediatrics
Lab LIM36
Street address Av. Dr. Eneas Carvalho de Aguiar 647
City Sao Paulo
State/province SP
ZIP/Postal code 05403-900
Country Brazil
 
Platforms (1)
GPL21576 Agilent-070156 Human_miRNA_V21.0_Microarray 046064 (Probe Name version)
Samples (11)
GSM2674568 thymus_minipuberty_MM1
GSM2674569 thymus_minipuberty_MM2
GSM2674570 thymus_minipuberty_MM3
This SubSeries is part of SuperSeries:
GSE113597 Minipuberty and Sexual Dimorphism in the Infant Human Thymus
Relations
BioProject PRJNA390983

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE100204_RAW.tar 70.6 Mb (http)(custom) TAR (of TXT)
GSE100204_processed_data_with_genename.txt.gz 148.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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