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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Dec 01, 2010 |
| Title |
Agilent-017278 whole human genome (hg17) custom 4×44k array |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Homo sapiens |
| Manufacturer |
Agilent Technologies |
| Manufacture protocol |
see manufacturer's web site at http://www.agilent.com/
|
| |
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| Submission date |
Jan 11, 2010 |
| Last update date |
Jan 18, 2013 |
| Contact name |
GEO admin |
| E-mail(s) |
geo@ncbi.nlm.nih.gov
|
| Organization name |
NCBI/NLM/NIH
|
| Street address |
9000 Rockville Pike
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Samples (55)
|
GSM495032, GSM495033, GSM495034, GSM495035, GSM495036, GSM495037
GSM495038, GSM495039, GSM848938, GSM1122707, GSM1122708, GSM1122709, GSM1122710, GSM1122711, GSM1122712, GSM1122713, GSM1122714, GSM1122715, GSM1122716, GSM1122717, GSM1122718, GSM1122719, GSM1122720, GSM1122721, GSM1122722, GSM1122723, GSM1122724, GSM1122725, GSM3580340, GSM3580341, GSM3580342, GSM3580343, GSM3580344, GSM3580345, GSM3580346, GSM3580347, GSM3580348, GSM3580349, GSM3580350, GSM3580351, GSM3580352, GSM3580353, GSM3580354, GSM3580355, GSM3580356, GSM3580357, GSM3580358, GSM3580359, GSM3580360, GSM3580361, GSM3580362, GSM3580363, GSM3580364, GSM3580365, GSM3580366
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| Series (6)
|
| GSE19823 |
Interindividual comparison of methylation profiling by MSAM |
| GSE34427 |
DNA methylation analysis of Colon Cancer cell line SW48 |
| GSE34429 |
Expression and DNA methylation of colon cancer cell lines |
| GSE46063 |
Age-related epigenetic drift in the pathogenesis of MDS and AML part 1 |
| GSE46067 |
Age-related epigenetic drift in the pathogenesis of MDS and AML |
| GSE125286 |
Genomic Whole-Organ Map of Mucosal Field Effects Initiating Human Bladder Carcinogenesis |
|
| Relations |
| Alternative to |
GPL13380 |
| Data table header descriptions |
| ID |
Agilent feature number |
| Row |
|
| Col |
|
| ControlType |
Control type |
| ProbeName |
Probe identifier |
| GeneName |
Gene Symbol |
| SystematicName |
Chromosome location |
| GB_RANGE |
|
| DESCRIPTION |
Description |
| SEQUENCE |
|
| SPOT_ID |
|
| Data table |
| ID |
Row |
Col |
ControlType |
ProbeName |
GeneName |
SystematicName |
GB_RANGE |
DESCRIPTION |
SEQUENCE |
SPOT_ID |
| 1 |
1 |
1 |
1 |
HsCGHBrightCorner |
HsCGHBrightCorner |
HsCGHBrightCorner |
|
|
|
--HsCGHBrightCorner |
| 2 |
1 |
2 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 3 |
1 |
3 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 4 |
1 |
4 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 5 |
1 |
5 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 6 |
1 |
6 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 7 |
1 |
7 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 8 |
1 |
8 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 9 |
1 |
9 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 10 |
1 |
10 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 11 |
1 |
11 |
1 |
DarkCorner |
DarkCorner |
DarkCorner |
|
|
|
--DarkCorner |
| 12 |
1 |
12 |
0 |
A_17_P07838081 |
VEGFB |
chr11:063757946-063757997 |
NC_000011.8[063757946..063757997] |
ag_LACat|PROMOTER |
GTGAAGCAGATGCACCTTAACTTCATGGATGAAAAGGATCGGATCATCACAG |
|
| 13 |
1 |
13 |
0 |
A_17_P00746851 |
FLJ10748 |
chr1:202045046-202045092 |
NC_000001.8[202045046..202045092] |
ag_LACat|INSIDE |
GTCACACATGCAGATGAGGAGATGAAGTGAACAGCAGGAAGGAGAAG |
|
| 14 |
1 |
14 |
0 |
A_17_P17160033 |
RPS9 |
chr19:059396559-059396603 |
NC_000019.8[059396559..059396603] |
ag_LACat|INSIDE |
GTTTGCTTAGGTGAGGTGCGGCGGTGTGCTTTTTCTCTAGGGTTT |
|
| 15 |
1 |
15 |
0 |
A_17_P07601616 |
LOC492304 |
chr11:002107936-002107981 |
NC_000011.8[002107936..002107981] |
ag_LACat|INSIDE |
CCCAGCCTGATGGAACCCTCTGTTTACACACCTGCTAGCCCCTTC |
|
| 16 |
1 |
16 |
0 |
A_17_P09764616 |
PTPN9 |
chr15:073659563-073659607 |
NC_000015.8[073659563..073659607] |
ag_LACat|PROMOTER |
CCTTCAGACAACAGGAAGGTGCTGTGAGTTGTGATGCTCCTATGA |
|
| 17 |
1 |
17 |
0 |
A_17_P10906584 |
COMP |
chr19:018763279-018763323 |
NC_000019.8[018763279..018763323] |
ag_LACat|PROMOTER |
AATCCGACATGGTGGGGAAACTGAGTCCCGGGGTCTGTGGAGAGA |
|
| 18 |
1 |
18 |
0 |
A_17_P01284788 |
TACR1 |
chr2:075339392-075339437 |
NC_000002.9[075339392..075339437] |
ag_LACat|PROMOTER |
AAAGACTCGCCAGTCCGTATAAACCCTTTTGGAGAAGCCAAGATGG |
|
| 19 |
1 |
19 |
0 |
A_17_P15052013 |
CAP1 |
chr1:040278901-040278945 |
NC_000001.8[040278901..040278945] |
ag_LACat|PROMOTER |
AGTCGCGGGCCAGCCTAGCGCTTCAGCCGGCGGCTCATTTCCGGT |
|
| 20 |
1 |
20 |
0 |
A_17_P11260413 |
CABLES2 |
chr20:060403439-060403483 |
NC_000020.9[060403439..060403483] |
ag_LACat|INSIDE |
GACCGCTTGGCACAGATGAGCACGATCCTGCAGGGGGACGGAGTC |
|
Total number of rows: 44674
Table truncated, full table size 6880 Kbytes.
| Supplementary data files not provided |
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