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Platform GPL9496 Query DataSets for GPL9496
Status Public on Nov 10, 2009
Title SMD Print_1524
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
Manufacturer Stanford Functional Genomics Facility, Stanford School of Medicine
Manufacture protocol Material is transferred from microtiter plate wells to the slide surface by an automated print head
Support glass
 
 
Submission date Oct 30, 2009
Last update date Nov 10, 2009
Contact name Patrick O Brown
E-mail(s) pbrown@cmgm.stanford.edu
Organization name Stanford university school of medicine
Department Department of biochemistry
Street address Beckman Center b439
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Samples (1) GSM466875
Series (2)
GSE18837 Unamplified mRNA abundance in miR-124 and mock-transfected cells
GSE18889 Concordant Regulation of Translation and mRNA Abundance for Hundreds of Targets of a Human microRNA

Data table header descriptions
ID
MetaColumn
MetaRow
Column
Row
Reporter Name
Reporter Species
Reporter BioSequence [gcContent]
Reporter BioSequence [length]
Reporter BioSequence [meltingTemp]
SEQUENCE
Repoter Biosequence Type
Repoter BioSequence PolymerType
Reporter Group[role]
Reporter ControlType
CompositeSequence Name
CompositeSequence BioSequence [ClusterId]
CompositeSequence BioSequence [Gene Name]
CompositeSequence BioSequence [Gene Symbol]
CompositeSequence BioSequence [GeneId]
CompositeSequence BioSequence [GenBank]
SPOT_ID

Data table
ID MetaColumn MetaRow Column Row Reporter Name Reporter Species Reporter BioSequence [gcContent] Reporter BioSequence [length] Reporter BioSequence [meltingTemp] SEQUENCE Repoter Biosequence Type Repoter BioSequence PolymerType Reporter Group[role] Reporter ControlType CompositeSequence Name CompositeSequence BioSequence [ClusterId] CompositeSequence BioSequence [Gene Name] CompositeSequence BioSequence [Gene Symbol] CompositeSequence BioSequence [GeneId] CompositeSequence BioSequence [GenBank] SPOT_ID
1 1 1 1 1 hSQ025392 Homo sapiens 35.71 70 72 GATTGCACATTGTTGTTTTTTTAATAGTCATTCCAAATATGAGATGCATTGTTACAGGAAGTCCCTTGCC ss_oligo DNA Control control_positive 60 Hs.520640 actin, beta ACTB 60 NM_001101 CONTROL
30 1 1 1 2 hSQ010940 Homo sapiens 51.43 70 79 ATTGTTCCCACTTGCACCTCTCCACCTTTGGCACTAGAACTCCTGAGACACCACTTCTCATGCTTCTCCC ss_oligo DNA Experimental 5326 Hs.154104 Pleiomorphic adenoma gene-like 2 PLAGL2 5326 PLAGL2
59 1 1 1 3 hSQ044800 Homo sapiens 47.14 70 77 TTTATTTTGCTAGGGAGGTAGTCAGTGGCGCACAAAGGGTAACAAGCAGTGATAGTGGGGATGCTTTCCA ss_oligo DNA Experimental 51545 zinc finger protein 581 ZNF581 51545 ZNF581
88 1 1 1 4 hSQ025662 Homo sapiens 41.43 70 75 GCAATGATGTGAATCTCTCACTGAATTCAACCTTGAAGTGCGAATCCATGAGCTTTTTAACCCTGAGCAA ss_oligo DNA Experimental 26815 X97584 26815 X97584 X97584
117 1 1 1 5 hSQ020437 Homo sapiens 35.71 70 72 CTGATGTCTATTTTATTCTACATAAGAGCCATATGTAATGTACTGTAACAAAGGAGCTTCTTGTCCCCTT ss_oligo DNA Experimental 8898 Hs.181326 myotubularin related protein 2 MTMR2 8898 MTMR2
146 1 1 1 6 hSQ043160 Homo sapiens 40.00 70 74 TTCACAGTCCACAGGGTTCAAATGACTTGGGTAACAGAAGTTATTCTTAGCTTACCTGTTATGTGACAGT ss_oligo DNA Experimental 9615 Hs.494163 guanine deaminase GDA 9615 NM_004293 GDA
175 1 1 1 7 hSQ004718 Homo sapiens 50.00 70 78 ACGCAGGAAGAGTGCTTAGGAGTAACTTGTTTCTAACACCTGTGTGCTGAGTGCCAATGCTGGGTGTGGT ss_oligo DNA Experimental 219743 Hs.533655 Trypsin domain containing 1 TYSND1 219743 TYSND1
204 1 1 1 8 hSQ032051 Homo sapiens 28.57 70 69 GTAATAATGAATTGTTTAAAAAACAGCTCATAATTGATGCCAAATTAAAGCACTGTGTACCCATTAAGAT ss_oligo DNA Experimental 1349 Hs.522699 Cytochrome c oxidase subunit VIIb COX7B 1349 COX7B
233 1 1 1 9 hSQ021814 Homo sapiens 32.86 70 71 CTTGCCAAAAAGGTTTTGGTTATGAAAGTGAATGTTATATATTTAATATTAAGTGAACCTCCCGTGCCTT ss_oligo DNA Experimental 5509 Hs.42215 Protein phosphatase 1, regulatory (inhibitor) subunit 3D PPP1R3D 5509 PPP1R3D
262 1 1 1 10 hSQ014117 Homo sapiens 41.43 70 75 CATGCCTCTTTTGGAAAGATACCAGTTTTATCAACAACCTAGCGCATGTCACATCTCTGTCTAGATCTGA ss_oligo DNA Experimental 55033 Hs.571333 FK506 binding protein 14, 22 kDa FKBP14 55033 FKBP14
291 1 1 1 11 hSQ043020 Homo sapiens 52.86 70 79 TTATGGAGGTGGTCCAGCACAGGTTCCACTACCTGGTGGCTTTCCTGGAGGACAGATGCCTTCTCAGTAT ss_oligo DNA Control control_tiling 310 Hs.631827 Annexin A7 ANXA7 310 CONTROL
320 1 1 1 12 hSQ027816 Homo sapiens 44.29 70 76 GCTCCTGAGGTGCATTTTCTCATCATCCTTGCTTTACCACAATGAGCAATGAGGTCGGGTTTTATATGCA ss_oligo DNA Experimental 2017 Hs.632133 cortactin CTTN 2017 CTTN
349 1 1 1 13 hSQ031109 Homo sapiens 27.14 70 69 GGGTAATTTTCATTAGTTGTTTTATTTGTTTTGATTTGAAACCTAATTTGACTGTTTAAAATGTTGGCCA ss_oligo DNA Experimental 284441 actin-related protein 2 pseudogene LOC284441 284441 XM_208204 LOC284441
378 1 1 1 14 hSQ030164 Homo sapiens 47.14 70 77 GGCTAGGTTCGGCGATTTTACTTTAAGGGGTTCAGCCTCAACCTAAGATCCACATGGAGTTGCTGTTACA ss_oligo DNA Experimental miRNA_miR-194 miRNA_miR-194 miRNA_miR-194 miRNA_miR-194
407 1 1 1 15 hSQ018611 Homo sapiens 45.71 70 76 CGGTGTGTTTTGATATGAAAACTCTCATGAATAAACATCTCCGTGAAACGCCAAGGCCCTCGTCAAACCC ss_oligo DNA Experimental 51529 Hs.534456 APC11 anaphase promoting complex subunit 11 homolog (yeast) ANAPC11 51529 NM_001002244 ANAPC11
436 1 1 1 16 hSQ036804 Homo sapiens 32.86 70 71 TCACCTTTGACTATGAACAAGTAACGGTAACATTCCTTTTGTGTATTCAATAATGCAGTTAGTTTACCTT ss_oligo DNA Experimental 283852 Hs.461131 Cytochrome b5 type B (outer mitochondrial membrane) CYB5B 283852 AK098148 CYB5B
465 1 1 1 17 hSQ025977 Homo sapiens 42.86 70 75 GCAGCATTGCTGTTGATATTAGTGAGAATCTGAAGGAGAAGAAAACAGATGCTAAGCAGCAAGTGTCAGG ss_oligo DNA Experimental 10557 Hs.94986 ribonuclease P/MRP 38kDa subunit RPP38 10557 RPP38
494 1 1 1 18 hSQ033047 Homo sapiens 32.86 70 71 GTCTTTTGTGCTACAGTTTCGTAGCATGAGTTTAAATCAAGATTATGATGAGTAAATGTGTATGGGTTAA ss_oligo DNA Experimental 5591 Hs.700597 protein kinase, DNA-activated, catalytic polypeptide PRKDC 5591 PRKDC
523 1 1 1 19 hSQ031020 Homo sapiens 54.29 70 80 GGGGGACATATGGTGGAAAACCATGATGGAGCTCAGGAGCCTGGATACCCAAAAAGCCACCTGCCACCTT ss_oligo DNA Experimental 9436 Hs.194721 Natural cytotoxicity triggering receptor 2 NCR2 9436 NCR2
552 1 1 1 20 hSQ033883 Homo sapiens 35.71 70 72 GTGTTGTGCCTACTTAATTCTGATAAACCTGTCTAAGCAATACTTAGGAGGCTTACTTCTTTGGATTAAA ss_oligo DNA Experimental 28955 Hs.592051 Dexamethasone-induced transcript DEXI 28955 NM_014015 DEXI

Total number of rows: 44544

Table truncated, full table size 9649 Kbytes.




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Supplementary file Size Download File type/resource
GPL9496_Print_1524.adf.gz 4.1 Mb (ftp)(http) ADF

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