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Status
Public on May 01, 2010
Title
Agilent-019597 FHM_Denslow_8x15K [Feature Number version]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Pimephales promelas Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Fathead minnows array with annotated targets. Arrays of this design have barcodes that begin with 16019597 or 2519597.
Contributor(s)
Denslow ND , Liu L Submission date
Sep 21, 2009
Last update date
Jul 22, 2013
Contact name
Natalia Vinas
E-mail(s)
natalia@icnanotox.org, nataliarv@gmail.com Phone
6016343764
Organization name
Mississippi State University
Street address
3909 Halls Ferry Rd
City
Vicksburg
State/province
MS
ZIP/Postal code
39180
Country
USA
Samples (590)
GSM456136 , GSM456137 , GSM456138 , GSM456139 , GSM456140 , GSM456141
GSM456142 ,
GSM456143 ,
GSM456144 ,
GSM456145 ,
GSM456146 ,
GSM456147 ,
GSM456148 ,
GSM456149 ,
GSM456150 ,
GSM456151 ,
GSM456152 ,
GSM456153 ,
GSM456154 ,
GSM456155 ,
GSM456158 ,
GSM456159 ,
GSM456160 ,
GSM456161 ,
GSM456946 ,
GSM456947 ,
GSM456948 ,
GSM456949 ,
GSM456950 ,
GSM457015 ,
GSM576073 ,
GSM576075 ,
GSM576077 ,
GSM576078 ,
GSM576079 ,
GSM576081 ,
GSM576082 ,
GSM576083 ,
GSM576084 ,
GSM576085 ,
GSM576086 ,
GSM576087 ,
GSM576088 ,
GSM576089 ,
GSM576090 ,
GSM576092 ,
GSM576093 ,
GSM576094 ,
GSM576095 ,
GSM576096 ,
GSM576097 ,
GSM576099 ,
GSM576100 ,
GSM576101 ,
GSM576102 ,
GSM576103 ,
GSM576104 ,
GSM576105 ,
GSM576106 ,
GSM576107 ,
GSM576108 ,
GSM576109 ,
GSM576110 ,
GSM576113 ,
GSM576115 ,
GSM576116 ,
GSM576117 ,
GSM576118 ,
GSM662870 ,
GSM662871 ,
GSM662872 ,
GSM662873 ,
GSM662874 ,
GSM662875 ,
GSM662876 ,
GSM662877 ,
GSM662878 ,
GSM662879 ,
GSM662880 ,
GSM663654 ,
GSM663655 ,
GSM663656 ,
GSM663657 ,
GSM663658 ,
GSM663659 ,
GSM663660 ,
GSM663661 ,
GSM663662 ,
GSM663663 ,
GSM663664 ,
GSM663665 ,
GSM700949 ,
GSM700950 ,
GSM700951 ,
GSM700952 ,
GSM700953 ,
GSM700954 ,
GSM700955 ,
GSM700956 ,
GSM700957 ,
GSM700958 ,
GSM700959 ,
GSM700960 ,
GSM700961 ,
GSM700962 ,
GSM700963 ,
GSM700964 ,
GSM700965 ,
GSM700966 ,
GSM700967 ,
GSM700968 ,
GSM700969 ,
GSM700970 ,
GSM700971 ,
GSM700972 ,
GSM700973 ,
GSM700974 ,
GSM700975 ,
GSM700976 ,
GSM700977 ,
GSM700978 ,
GSM700979 ,
GSM700980 ,
GSM725475 ,
GSM725476 ,
GSM725477 ,
GSM725478 ,
GSM725479 ,
GSM725480 ,
GSM725481 ,
GSM725482 ,
GSM725483 ,
GSM725484 ,
GSM725485 ,
GSM725486 ,
GSM725487 ,
GSM725488 ,
GSM725489 ,
GSM725490 ,
GSM725491 ,
GSM725492 ,
GSM725493 ,
GSM725494 ,
GSM725495 ,
GSM725496 ,
GSM725497 ,
GSM725498 ,
GSM725499 ,
GSM725500 ,
GSM725501 ,
GSM725502 ,
GSM725503 ,
GSM725504 ,
GSM725505 ,
GSM725506 ,
GSM725507 ,
GSM725508 ,
GSM725509 ,
GSM725510 ,
GSM725511 ,
GSM725512 ,
GSM938000 ,
GSM938001 ,
GSM938002 ,
GSM938003 ,
GSM938004 ,
GSM938005 ,
GSM938006 ,
GSM938007 ,
GSM938008 ,
GSM938009 ,
GSM938010 ,
GSM938011 ,
GSM938012 ,
GSM938013 ,
GSM938014 ,
GSM938015 ,
GSM938016 ,
GSM938017 ,
GSM938018 ,
GSM938019 ,
GSM938020 ,
GSM938021 ,
GSM938022 ,
GSM938023 ,
GSM938024 ,
GSM938025 ,
GSM938026 ,
GSM938027 ,
GSM938028 ,
GSM938029 ,
GSM938030 ,
GSM938031 ,
GSM938032 ,
GSM938033 ,
GSM938034 ,
GSM938035 ,
GSM938036 ,
GSM938037 ,
GSM938038 ,
GSM938039 ,
GSM938040 ,
GSM938041 ,
GSM938042 ,
GSM938043 ,
GSM938044 ,
GSM938045 ,
GSM938046 ,
GSM938047 ,
GSM938048 ,
GSM938049 ,
GSM938050 ,
GSM938051 ,
GSM938052 ,
GSM1193717 ,
GSM1193718 ,
GSM1193719 ,
GSM1193720 ,
GSM1193721 ,
GSM1193722 ,
GSM1193723 ,
GSM1193724 ,
GSM1193725 ,
GSM1193726 ,
GSM1193727 ,
GSM1193728 ,
GSM1193729 ,
GSM1193730 ,
GSM1193731 ,
GSM1193732 ,
GSM1193733 ,
GSM1193734 ,
GSM1193735 ,
GSM1193736 ,
GSM1193737 ,
GSM1193738 ,
GSM1193739 ,
GSM1193740 ,
GSM1193741 ,
GSM1193742 ,
GSM1193743 ,
GSM1193744 ,
GSM1193745 ,
GSM1193746 ,
GSM1193747 ,
GSM1193748 ,
GSM1193749 ,
GSM1193750 ,
GSM1193751 ,
GSM1193752 ,
GSM1193753 ,
GSM1193754 ,
GSM1193755 ,
GSM1193756 ,
GSM1193757 ,
GSM1193758 ,
GSM1193759 ,
GSM1193760 ,
GSM1193761 ,
GSM1193762 ,
GSM1193763 ,
GSM1193764 ,
GSM1193765 ,
GSM1193766 ,
GSM1193767 ,
GSM1193768 ,
GSM1193769 ,
GSM1193770 ,
GSM1193771 ,
GSM1193772 ,
GSM1193773 ,
GSM1193774 ,
GSM1193775 ,
GSM1193776 ,
GSM1193777 ,
GSM1193778 ,
GSM1287645 ,
GSM1287646 ,
GSM1287647 ,
GSM1287648 ,
GSM1287649 ,
GSM1287650 ,
GSM1287651 ,
GSM1287652 ,
GSM1287653 ,
GSM1287654 ,
GSM1287655 ,
GSM1287656 ,
GSM1287657 ,
GSM1287658 ,
GSM1287659 ,
GSM1287660 ,
GSM1287661 ,
GSM1287662 ,
GSM1287663 ,
GSM1287664 ,
GSM1287665 ,
GSM1287666 ,
GSM1287667 ,
GSM1287668 ,
GSM1287669 ,
GSM1287670 ,
GSM1287671 ,
GSM1287672 ,
GSM1287673 ,
GSM1287674 ,
GSM1287675 ,
GSM1287676 ,
GSM1287677 ,
GSM1287678 ,
GSM1287679 ,
GSM1287680 ,
GSM1287681 ,
GSM1287682 ,
GSM1287683 ,
GSM1287684 ,
GSM1287685 ,
GSM1287686 ,
GSM1287687 ,
GSM1287688 ,
GSM1287689 ,
GSM1287690 ,
GSM1287691 ,
GSM1287692 ,
GSM1287693 ,
GSM1287694 ,
GSM1287695 ,
GSM1287696 ,
GSM1287697 ,
GSM1819679 ,
GSM1819680 ,
GSM1819681 ,
GSM1819682 ,
GSM1819683 ,
GSM1819684 ,
GSM1819685 ,
GSM1819686 ,
GSM1819687 ,
GSM1819688 ,
GSM1819689 ,
GSM1819690 ,
GSM1819691 ,
GSM1819692 ,
GSM1819693 ,
GSM1819694 ,
GSM1819695 ,
GSM1819696 ,
GSM1819697 ,
GSM1819698 ,
GSM1819699 ,
GSM1819700 ,
GSM1819701 ,
GSM1819702 ,
GSM1819703 ,
GSM1819704 ,
GSM1819705 ,
GSM1819706 ,
GSM1819707 ,
GSM1819708 ,
GSM1819709 ,
GSM1819710 ,
GSM1819711 ,
GSM1819712 ,
GSM1819713 ,
GSM1819714 ,
GSM1819715 ,
GSM1819716 ,
GSM1819717 ,
GSM1819718 ,
GSM1819719 ,
GSM1819720 ,
GSM1819721 ,
GSM1819722 ,
GSM1819723 ,
GSM1819724 ,
GSM1819725 ,
GSM1819726 ,
GSM1819727 ,
GSM1819728 ,
GSM1819729 ,
GSM1819730 ,
GSM1819731 ,
GSM1819732 ,
GSM1819733 ,
GSM1819734 ,
GSM1819735 ,
GSM1819736 ,
GSM1819737 ,
GSM1819738 ,
GSM1819739 ,
GSM1819740 ,
GSM1819741 ,
GSM1819742 ,
GSM1819743 ,
GSM1819744 ,
GSM1819745 ,
GSM1819746 ,
GSM1819747 ,
GSM1819748 ,
GSM1819749 ,
GSM1819750 ,
GSM1819751 ,
GSM1819752 ,
GSM1819753 ,
GSM1819754 ,
GSM1819755 ,
GSM1819756 ,
GSM1819757 ,
GSM1819758 ,
GSM1819759 ,
GSM1819760 ,
GSM1819761 ,
GSM1819762 ,
GSM1819763 ,
GSM1819764 ,
GSM1819765 ,
GSM1819766 ,
GSM1819767 ,
GSM1819768 ,
GSM1819769 ,
GSM1819770 ,
GSM1819771 ,
GSM1819772 ,
GSM1819773 ,
GSM1819774 ,
GSM1819775 ,
GSM1819776 ,
GSM1819777 ,
GSM1819778 ,
GSM1819779 ,
GSM1819780 ,
GSM1819781 ,
GSM1819782 ,
GSM1819783 ,
GSM1819784 ,
GSM1819785 ,
GSM1819786 ,
GSM1819787 ,
GSM1819788 ,
GSM1819789 ,
GSM1819790 ,
GSM1819791 ,
GSM1819792 ,
GSM1819793 ,
GSM1819794 ,
GSM1819795 ,
GSM1819796 ,
GSM1819797 ,
GSM1819798 ,
GSM1819799 ,
GSM1819800 ,
GSM1819801 ,
GSM1819802 ,
GSM1819803 ,
GSM1819804 ,
GSM1819805 ,
GSM1819806 ,
GSM1819807 ,
GSM1819808 ,
GSM1819809 ,
GSM1819810 ,
GSM1819811 ,
GSM1819812 ,
GSM1819813 ,
GSM1819814 ,
GSM1819815 ,
GSM1819816 ,
GSM1819817 ,
GSM1819818 ,
GSM1819819 ,
GSM1819820 ,
GSM1819821 ,
GSM1819822 ,
GSM1819823 ,
GSM1819824 ,
GSM1819825 ,
GSM1819826 ,
GSM1819827 ,
GSM1819828 ,
GSM1819829 ,
GSM1819830 ,
GSM1819831 ,
GSM1819832 ,
GSM1819833 ,
GSM1819834 ,
GSM1819835 ,
GSM1819836 ,
GSM1819837 ,
GSM1819838 ,
GSM1876155 ,
GSM1876156 ,
GSM1876157 ,
GSM1876158 ,
GSM1876159 ,
GSM1876160 ,
GSM1876161 ,
GSM1876162 ,
GSM1876163 ,
GSM1876164 ,
GSM1876165 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (14)
GSE18254 Influence of Gross Ovarian Stage on Transcript Profiles in Fathead Minnow (Pimephales promelas) Ovary Tissue
GSE23521 Effect of surface waters from Eglin Air Force Base on gene expression in fathead minnow (Pimephales promelas)
GSE26958 Effects of a short-term exposure to the fungicide prochloraz on endocrine function and gene expression in female fathead minnows (Pimephales promelas)
GSE28353 Effects of bisphenol A on ovarian gene expression in fathead minnows and zebrafish [FHM data set]
GSE28354 Effects of bisphenol A on ovarian gene expression in fathead minnows and zebrafish
GSE29350 Gene Expression of Fathead Minnow Exposed to Primary and Secondary Treated Effluents
GSE38287 The ureic-based herbicide linuron and the model anti-androgen flutamide regulate common gene networks in the fathead minnow (Pimephales promelas) ovary
GSE38288 The effects of progesterone on the fathead minnow testis
GSE38289 Effects of DHT on the ovary of fathead minnow
GSE49098 Transcriptomic-Based Effects Monitoring for Endocrine Active Chemicals—Assessing Relative Contribution of Treated Wastewater to Downstream Pollution
GSE53204 Using transcriptomic tools to evaluate biological effects across effluent gradients at a diverse set of study sites in Minnesota, USA
GSE70807 Fish Connectivity Mapping: Linking Chemical Stressors by Their MOA-Driven Transcriptomic Profiles
GSE72976 Derivation and Evaluation of Putative Adverse Outcome Pathways for the Effects of Cyclooxygenase Inhibitors on Reproductive Processes in Fish
GSE96678 Prioritization of Contaminants of Emerging Concern in wastewater treatment plant discharges using transcriptional effects in caged fish
Relations Alternative to
GPL10259
Data table header descriptions ID COL Column
ROW Row
NAME Name
PROBE_NAME Spot Identifier
CONTROL_TYPE Control type
Query Name Unique identifier for the FASTA file in the University of Florida database
NR Hit Acc# Accession number for the top hit in the NR database
NR E-Value E-value for the top hit in the NR database
NR Hit Def Gene definition for the top hit in the NR database
NT Hit Acc# Accession number for the top hit in the NT database
NT E-Value E-value for the top hit in the NT database
NTHit Def Gene definition for the top hit in the NT database
Human Homology Gene Human homolg
Zebrafish Homolog Zebrafish homolog
CHROMOSOMAL_LOCATION Chromosomal location
Gene Title Gene definition
GO: Biological_Process Gene Ontology for Biological process
GO: Cellular Component Gene Ontology for Cellular component
GO: Molecular Function Gene Ontology for Molecular function
SEQUENCE Sequence
SPOT_ID control
Data table ID COL ROW NAME PROBE_NAME CONTROL_TYPE Query Name NR Hit Acc# NR E-Value NR Hit Def NT Hit Acc# NT E-Value NTHit Def Human Homology Gene Zebrafish Homolog CHROMOSOMAL_LOCATION Gene Title GO: Biological_Process GO: Cellular Component GO: Molecular Function SEQUENCE SPOT_ID 1
96
164
GE_BrightCorner
GE_BrightCorner
pos
CONTROL
2
96
162
DarkCorner
DarkCorner
pos
CONTROL
3
96
160
DarkCorner
DarkCorner
pos
CONTROL
4
96
158
UF_Ppr_AF_113939
UF_Ppr_AF_113939
FALSE
FHM_JGI_UF.12050.C1
NP_001008579
3.04E-09
hypothetical protein LOC494036 [Danio rerio] >gi|56269775|gb|AAH86965.1| Zgc:92239 [Danio rerio]
CU019563
0
Zebrafish DNA sequence from clone DKEYP-87A6 in linkage group 24, complete sequence
494036
unmapped
Zgc:92239 /
GO:0008150; biological_process
GO:0005575; cellular_component
GO:0003674; molecular_function
ACACTTTGAGCTCTATATGAAATGTTCATGTGTGAATAATAAAGAACGTCCCTCAGGACC
5
96
156
UF_Ppr_AF_104190
UF_Ppr_AF_104190
FALSE
FHM_JGI_UF.2652.C2
NP_001002425
0
hypothetical protein LOC436698 [Danio rerio] >gi|49901081|gb|AAH76145.1| Zgc:92661 [Danio rerio]
NM_001002425
0
Danio rerio zgc:92661 (zgc:92661), mRNA >gi|49901080|gb|BC076145.1| Danio rerio zgc:92661, mRNA (cDNA clone MGC:92661 IMAGE:7073063), complete cds
54930
436698
unmapped
Zgc:92661 /
GO:0008150; biological_process
GO:0005575; cellular_component
GO:0003674; molecular_function
GATGTTGCTGCCTAAACTACACGCAATCACAATTTTCTAAAACATATTGTTTCCAATACC
6
96
154
UF_Ppr_AF_108463
UF_Ppr_AF_108463
FALSE
FHM_JGI_UF.3506.C5
No Hit
XM_677661
2.32E-13
PREDICTED: Danio rerio similar to MGC130926 protein (LOC555208), mRNA
555208
unmapped
Similar To MGC130926 Protein /
GGTTCTTGGTCCATGTTTCATTTGATTCACACCTTTCGTTATTTCAATAAACAGTAATGC
7
96
152
UF_Ppr_AF_101332
UF_Ppr_AF_101332
FALSE
FHM_JGI_UF.4635.C1
CAP09297
0
novel protein [Danio rerio]
NM_001089452
0
Danio rerio si:dkey-81n9.1 (si:dkey-81n9.1), mRNA >gi|126631518|gb|BC133911.1| Danio rerio si:dkey-81n9.1, mRNA (cDNA clone MGC:162231 IMAGE:8732316), complete cds
79740
557473
unmapped
Hypothetical LOC557473 / Si:dkey-81n9.1 /
GO:0005622; intracellular
GO:0008270; zinc ion binding
AAATACACCACACACAGGTGTTGTTTGTGAATGATGGTGTTGACCTGGAGGATGAGGAAG
8
96
150
UF_Ppr_AF_106908
UF_Ppr_AF_106908
FALSE
gi_73452206_gb_DT192155.1_DT192155
CAM13424
0
novel protein [Danio rerio]
XM_691328
0
PREDICTED: Danio rerio hypothetical LOC568016 (LOC568016), mRNA
200312
568016
unmapped
Hypothetical LOC568016 /
GO:0008270; zinc ion binding GO:0005515; protein binding
ATGCAACAGCCACAATCACTTATAAGACTTTTCTACAGGATAGCCTGGGGGCTACCTTGA
9
96
148
UF_Ppr_AF_101644
UF_Ppr_AF_101644
FALSE
gi_73647497_gb_DT306845.1_DT306845
XP_697593
0
PREDICTED: similar to ZNF336 [Danio rerio]
XM_692501
2.19E-38
PREDICTED: Danio rerio similar to ZNF336 (LOC569136), mRNA
9880
569136
unmapped
Similar To ZNF336 /
GO:0005622; intracellular
GO:0003676; nucleic acid binding GO:0008270; zinc ion binding GO:0005515; protein binding
TTTGATGATTCTGACACAGCAGCAGAAGAAGAACAGACGTCACATGACCCAGAAGCAGAA
10
96
146
UF_Ppr_AF_114932
UF_Ppr_AF_114932
FALSE
FHM_JGI_UF.3618.C1
NP_956357
0
EH-domain containing 2 [Danio rerio] >gi|39794606|gb|AAH63963.1| EH-domain containing 2 [Danio rerio] >gi|122891279|emb|CAM13016.1| novel protein (zgc:77671) [Danio rerio]
NM_200063
0
Danio rerio EH-domain containing 2 (ehd2), mRNA >gi|39794605|gb|BC063963.1| Danio rerio EH-domain containing 2, mRNA (cDNA clone MGC:77671 IMAGE:6997201), complete cds
2060
337401
unmapped
EH-domain Containing 2 /
GO:0005575; cellular_component
GO:0005509; calcium ion binding GO:0005525; GTP binding GO:0003924; GTPase activity GO:0000166; nucleotide binding
CTGACTGCTTCAGTTAACCAATGTTTTCACAGTAAATATATTGAGCTGAATAAAGACCCT
11
96
144
UF_Ppr_AF_106195
UF_Ppr_AF_106195
FALSE
FHM_JGI_UF.937.C1
NP_001017816
0
hypothetical protein LOC550514 [Danio rerio] >gi|62204826|gb|AAH92802.1| Zgc:110214 [Danio rerio]
NM_001017816
0
Danio rerio zgc:110214 (zgc:110214), mRNA >gi|62204825|gb|BC092802.1| Danio rerio zgc:110214, mRNA (cDNA clone MGC:110214 IMAGE:7295383), complete cds
51077
550514
unmapped
Zgc:110214 /
GO:0008150; biological_process
GO:0005575; cellular_component
GO:0003674; molecular_function
CAGACTATGCAAATGGGCATAATAATAATGGGGGTCTAATAAACCAGGGTTTCTCTTTTG
12
96
142
UF_Ppr_AF_105916
UF_Ppr_AF_105916
FALSE
FHM_JGI_UF.3218.C2
AAH67546
0
Rbb4l protein [Danio rerio]
BC067546
0
Danio rerio retinoblastoma binding protein 4, like, mRNA (cDNA clone MGC:85617 IMAGE:6524543), complete cds
5928
322129
unmapped
Retinoblastoma Binding Protein 4 / Retinoblastoma Binding Protein 4, Like /
GO:0006350; transcription GO:0006353; transcription termination GO:0006355; regulation of transcription, DNA-dependent
GO:0005634; nucleus
ATGACCAGAAACTGATGATCTGGGACACACGATCCAATAACACATCAAAGCCCAGTCACT
13
96
140
UF_Ppr_AF_111729
UF_Ppr_AF_111729
FALSE
FHM_JGI_UF.6654.C1
CAG04546
0
unnamed protein product [Tetraodon nigroviridis]
NM_001109715
0
Danio rerio zgc:165534 (zgc:165534), mRNA >gi|156229807|gb|BC152498.1| Danio rerio zgc:165534, mRNA (cDNA clone MGC:165534 IMAGE:2600771), complete cds
51172
569719
unmapped
Zgc:165534 /
GO:0008150; biological_process
GO:0016021; integral to membrane GO:0005575; cellular_component GO:0005794; Golgi apparatus GO:0016020; membrane
GO:0003674; molecular_function GO:0003944; N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase activity GO:0016787; hydrolase activity
CAAAACACAGGAGACCGGAAAATTTCAAGAATTTGTAGATGTGATATCGGCCCGTACGGC
14
96
138
UF_Ppr_AF_106019
UF_Ppr_AF_106019
FALSE
FHM_JGI_UF.10708.C1
XP_001024581
0.737375
Kinesin motor domain containing protein [Tetrahymena thermophila SB210] >gi|89306348|gb|EAS04336.1| Kinesin motor domain containing protein [Tetrahymena thermophila SB210]
XR_029170
0
PREDICTED: Danio rerio hypothetical protein LOC798575 (LOC798575), mRNA
798575
unmapped
Hypothetical Protein LOC798575 / Zgc:158324 /
GGTGACTCTAAAAACTCTATTGTGTTTTATTGCATGACGTTGGTCCCCTGTAATTAATTT
15
96
136
UF_Ppr_AF_111434
UF_Ppr_AF_111434
FALSE
FHM_JGI_UF.12753.C1
XP_683375
0
PREDICTED: hypothetical protein [Danio rerio]
XM_678283
0
PREDICTED: Danio rerio hypothetical LOC555692 (LOC555692), mRNA
54865
793751
unmapped
Hypothetical Protein LOC793751 / Similar To G Patch Domain Containing 4 /
GO:0005622; intracellular
GO:0003676; nucleic acid binding
ATTCAGATGATAGCAGCAGTTCTGAAGATGAGGACCAGAAACTGGACCTTTCCACCACTA
16
96
134
UF_Ppr_AF_109860
UF_Ppr_AF_109860
FALSE
gi_72415017_gb_DT085781.1_DT085781
XP_001344768
0
PREDICTED: hypothetical protein [Danio rerio]
XM_001344732
3.62E-09
PREDICTED: Danio rerio hypothetical protein LOC100005826 (LOC100005826), mRNA
100005644
unmapped
Hypothetical Protein LOC100005644 / Hypothetical Protein LOC100005826 /
GO:0008150; biological_process
GO:0005575; cellular_component
GO:0003674; molecular_function
GAGGAACAACCTGAGAGTATTTAAACACCTGATTGATTTAAACAACAGCAAATCAGTCAA
17
96
132
UF_Ppr_AF_114717
UF_Ppr_AF_114717
FALSE
FHM_JGI_UF.11484.C1
XP_001337201
0
PREDICTED: similar to TBC1 domain family, member 23 isoform 2 [Danio rerio]
XM_001337165
0
PREDICTED: Danio rerio similar to TBC1 domain family, member 23, transcript variant 2 (LOC798995), mRNA
55773
798995
unmapped
TBC1 Domain Family, Member 23 /
GO:0005622; intracellular
GO:0005097; Rab GTPase activator activity
ATCAGATGATGACAGAAAAGAGATTGTCAATATACAGACTTGGATCAACAAACCAGATGT
18
96
130
UF_Ppr_AF_105592
UF_Ppr_AF_105592
FALSE
FHM_JGI_UF.9592.C1
NP_998277
0
rab geranylgeranyl transferase b subunit [Danio rerio] >gi|66911331|gb|AAH97066.1| Zgc:56443 [Danio rerio] >gi|123235924|emb|CAM15111.1| novel protein similar to vertebrate Rab geranylgeranyltransferase, beta subunit (RABGGTB, zgc:56443) [Danio rerio]
NM_213112
0
Danio rerio zgc:56443 (zgc:56443), mRNA >gi|66911330|gb|BC097066.1| Danio rerio zgc:56443, mRNA (cDNA clone MGC:113990 IMAGE:7416299), complete cds
2342
406386
unmapped
Rab Geranylgeranyltransferase, Beta Subunit /
GO:0008150; biological_process
GO:0005575; cellular_component
GO:0016740; transferase activity GO:0003824; catalytic activity
CATTGGCAGAATTCACTGGATTGACAAATCGAAACTGCGCAATTTTATTCTTGCTTGCCA
19
96
128
UF_Ppr_AF_104673
UF_Ppr_AF_104673
FALSE
FHM_JGI_UF.8145.C1
XP_683719
0
PREDICTED: similar to NIMA (never in mitosis gene a)- related kinase 10,, partial [Danio rerio]
XM_678627
0
PREDICTED: Danio rerio similar to NIMA (never in mitosis gene a)- related kinase 10, (LOC555964), partial mRNA
555964
unmapped
Similar To NIMA- Related Kinase 10 /
GO:0006468; protein amino acid phosphorylation
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GAAGATCGGAGAGCTGTCTGTTGTGGAGCATATACTAGTTGTATTACAAGAATATGACAT
20
96
126
UF_Ppr_AF_110564
UF_Ppr_AF_110564
FALSE
FHM_JGI_UF.1313.C2
XP_693858
0
PREDICTED: hypothetical protein [Danio rerio]
BC115262
0
Danio rerio cDNA clone IMAGE:7051100, partial cds
9734
565482
unmapped
Hypothetical LOC565482 /
GO:0006350; transcription GO:0016568; chromatin modification GO:0016575; histone deacetylation GO:0007275; multicellular organismal development GO:0006355; regulation of transcription, DNA-dependent GO:0007049; cell cycle
GO:0000118; histone deacetylase complex GO:0005874; microtubule GO:0005737; cytoplasm GO:0005634; nucleus
GO:0016566; specific transcriptional repressor activity GO:0042826; histone deacetylase binding GO:0042903; tubulin deacetylase activity GO:0046872; metal ion binding GO:0003779; actin binding GO:0016787; hydrolase activity GO:0008270; zinc ion binding
TCTGCATCGTTATGAAGACGGGACGTTTTTCCCCAACTCAGAGGATGCTAACTATGACAA
15744 8402 Kbytes .Supplementary data files not provided
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