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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 01, 2009 |
| Title |
Umass/Reppert Danaus plexippus EST custom Nimblegen array |
| Technology type |
spotted oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Danaus plexippus |
| Manufacturer |
Roche Nimblegen |
| Manufacture protocol |
Roche Nimblegen Custom 4-plex gene expression array
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| Description |
All information related to EST and contigs are located at the ESTIMA website (see web link).
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| Web link |
http://titan.biotec.uiuc.edu/cgi-bin/ESTWebsite/estima_start?seqSet=butterfly
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| Contributor(s) |
Zhu H, Gegear RJ, Casselman A, Kanginakudru S, Reppert SM |
| Submission date |
Dec 17, 2008 |
| Last update date |
Jan 01, 2009 |
| Contact name |
Steven Reppert |
| E-mail(s) |
steven.reppert@umassmed.edu
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| Phone |
508-856-6148
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| Fax |
508-856-6266
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| Organization name |
University of Massachusetts Medical School
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| Department |
Neurobiology
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| Street address |
364 Plantation St
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| City |
Worcester |
| State/province |
MA |
| ZIP/Postal code |
01605 |
| Country |
USA |
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| Samples (40)
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GSM352399, GSM352401, GSM352402, GSM352403, GSM352404, GSM352405
GSM352406, GSM352407, GSM352408, GSM352409, GSM352410, GSM352411, GSM352412, GSM352413, GSM352414, GSM352415, GSM352416, GSM352417, GSM352418, GSM352419, GSM352420, GSM352421, GSM352422, GSM352423, GSM352424, GSM352425, GSM352426, GSM352427, GSM352428, GSM352445, GSM352554, GSM352555, GSM352556, GSM352557, GSM352558, GSM352559, GSM352560, GSM352561, GSM352562, GSM352563
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| Series (1) |
| GSE14041 |
Defining Behavioral and Molecular Differences Between Summer and Migratory Monarch Butterflies |
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| Data table header descriptions |
| ID |
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| SEQUENCE |
Oligonucleotide sequences of the array |
| CLONE_ID |
EST clone designation |
| SPOT_ID |
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| Data table |
| ID |
SEQUENCE |
CLONE_ID |
SPOT_ID |
| BF01001X1A03_f1P00005 |
CGTGGCACAGTCTGTCGTGTCTGGTACACAGCAGTGGTCGAGCTGGCACCACTCCGCGCC |
BF01001X1A03_f1 |
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| BF01001X1A03_f1P00084 |
GAAGCATCACAGTCACAACCGATGGCGGTCAACCCCGTCGTGCTACTCAAAACTGCTTTC |
BF01001X1A03_f1 |
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| BF01001X1A03_f1P00127 |
TACTCAAAACTGCTTTCCCTGGATTAGGCGACGTGTCAACACTACGGCTATCCACGATGA |
BF01001X1A03_f1 |
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| BF01001X1A03_f1P00130 |
TCAAAACTGCTTTCCCTGGATTAGGCGACGTGTCAACACTACGGCTATCCACGATGAGTA |
BF01001X1A03_f1 |
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| BF01001X1A03_f1P00136 |
CTGCTTTCCCTGGATTAGGCGACGTGTCAACACTACGGCTATCCACGATGAGTACGGAGC |
BF01001X1A03_f1 |
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| BF01001X1A03_f1P00141 |
TTCCCTGGATTAGGCGACGTGTCAACACTACGGCTATCCACGATGAGTACGGAGCGTGTG |
BF01001X1A03_f1 |
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| BF01001X1A03_f1P00144 |
CCTGGATTAGGCGACGTGTCAACACTACGGCTATCCACGATGAGTACGGAGCGTGTGTGC |
BF01001X1A03_f1 |
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| BF01001X1A04_f1P00205 |
TATGTGGAGGTAATGCTTTAAAGTCAGCACAGTAGGTGAAATTCCAGCAGAGACCAAATT |
BF01001X1A04_f1 |
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| BF01001X1A04_f1P00323 |
ATCTCCAAGATCAGGATCAAACCCATGCCTTTGCAGTGGGAGCTTGGAGTCTTAACCACT |
BF01001X1A04_f1 |
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| BF01001X1A04_f1P00327 |
CCAAGATCAGGATCAAACCCATGCCTTTGCAGTGGGAGCTTGGAGTCTTAACCACTGGAC |
BF01001X1A04_f1 |
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| BF01001X1A04_f1P00329 |
AAGATCAGGATCAAACCCATGCCTTTGCAGTGGGAGCTTGGAGTCTTAACCACTGGACCA |
BF01001X1A04_f1 |
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| BF01001X1A04_f1P00331 |
GATCAGGATCAAACCCATGCCTTTGCAGTGGGAGCTTGGAGTCTTAACCACTGGACCACC |
BF01001X1A04_f1 |
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| BF01001X1A04_f1P00333 |
TCAGGATCAAACCCATGCCTTTGCAGTGGGAGCTTGGAGTCTTAACCACTGGACCACCAG |
BF01001X1A04_f1 |
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| BF01001X1A04_f1P00422 |
CGGAGTACAGTTGACAAGGTTTGTTGCATCCAGCCCTATTTAGTAGTATGAGTTATATGC |
BF01001X1A04_f1 |
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| BF01001X1A05_f1P00002 |
TTCCGTTGCTGTCGGATGCGCGGCAGAAGACATAGTCTTAGAGCCTTTGCGAGGCAGAAG |
BF01001X1A05_f1 |
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| BF01001X1A05_f1P00071 |
GATTGTTTGGAAGGTTGAGTGTTGTGCCTTTGCGAGGCAGAAGATTTGTCTCCATGTAAC |
BF01001X1A05_f1 |
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| BF01001X1A05_f1P00568 |
GTGCTGCATTCGGTCCATCTATCAGGATTTGGGATCTCGAAAGCAAGGAAATGGTTGAAG |
BF01001X1A05_f1 |
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| BF01001X1A05_f1P00674 |
TCAATGCCTGTCATTGGCCTGGTCTACTGACGGACAAACCCTGTTTGCCGGTTACTCTGA |
BF01001X1A05_f1 |
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| BF01001X1A05_f1P00684 |
TCATTGGCCTGGTCTACTGACGGACAAACCCTGTTTGCCGGTTACTCTGACAACATCATA |
BF01001X1A05_f1 |
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| BF01001X1A05_f1P00696 |
TCTACTGACGGACAAACCCTGTTTGCCGGTTACTCTGACAACATCATAAGAGTGTGGCAG |
BF01001X1A05_f1 |
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Total number of rows: 65788
Table truncated, full table size 6774 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL7829_MonarchButterfly_080129_Danaus_Zhu_UMassMS_expr.ndf.gz |
4.3 Mb |
(ftp)(http) |
NDF |
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