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| Status |
Public on Nov 25, 2009 |
| Title |
Bacillus cereus Bc10987 - 1st design (1X22K) |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Bacillus cereus ATCC 10987 |
| Manufacturer |
Agilent |
| Manufacture protocol |
Agilent manufacture protocol.
Agilent uses its inkjet technology to print oligos onto glass slides.
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| Support |
glass |
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| Contributor(s) |
Moezelaar R, Abee T, van der Voort M |
| Submission date |
Nov 20, 2008 |
| Last update date |
Nov 25, 2009 |
| Contact name |
Maarten Mols |
| Organization name |
Wageningen University
|
| Department |
ATV
|
| Lab |
Food Microbiology
|
| Street address |
Bomenweg 2
|
| City |
Wageningen |
| ZIP/Postal code |
6703 HD |
| Country |
Netherlands |
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| Samples (60)
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GSM345000, GSM345001, GSM345002, GSM345003, GSM345004, GSM345005
GSM345006, GSM345007, GSM345008, GSM345009, GSM345010, GSM345011, GSM345012, GSM345013, GSM345014, GSM345015, GSM345016, GSM345017, GSM345018, GSM345019, GSM345020, GSM345021, GSM345022, GSM345023, GSM607064, GSM607065, GSM607066, GSM607067, GSM607068, GSM607069, GSM607070, GSM607071, GSM607072, GSM607073, GSM607074, GSM607075, GSM1908650, GSM1908651, GSM1908652, GSM1908653, GSM1908654, GSM1908655, GSM1908656, GSM1908657, GSM1908658, GSM1908659, GSM1908660, GSM1908661, GSM1908662, GSM1908663, GSM1908664, GSM1908665, GSM1908666, GSM1908667, GSM1908668, GSM1908669, GSM1908670, GSM1908671, GSM1908672, GSM1908673
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| Series (5)
|
| GSE13729 |
Comparative transcriptome and phenotype analysis of acid-stressed Bacillus cereus strain ATCC 10987 |
| GSE13773 |
Comparative transcriptome and phenotype analysis of acid-stressed Bacillus cereus strains |
| GSE24620 |
Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus ATCC 10987 |
| GSE24635 |
Comparative transcriptome analysis of biofilm and planktonic cells of Bacillus cereus |
| GSE74045 |
Transcriptome comparison between Bacillus cereus ATCC 10987 cells with and without iron starvation |
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| Data table header descriptions |
| ID |
|
| Row |
Position of probe on array grid, row |
| Col |
Position of probe on array grid, column |
| SEQUENCE |
Sequence of probe |
| ControlType |
-1; negative control spot, 1; positive control spot, 0; sample probe no control |
| ProbeName |
Name of the probe |
| ORF |
Bacillus cereus ATCC 10987 locus tag |
| SPOT_ID |
Alternative probe name |
| Data table |
| ID |
Row |
Col |
SEQUENCE |
ControlType |
ProbeName |
ORF |
SPOT_ID |
| 1 |
1 |
1 |
|
1 |
BrightCorner |
|
--BrightCorner |
| 2 |
1 |
2 |
|
-1 |
(-)3xSLv1 |
|
--NegativeControl |
| 4 |
1 |
4 |
AGCAGCATAAGGAAGTTATTTTGCATGAGTATAAAGGGATGAAATCAAAATTAAATGTTA |
0 |
BCE1391_2_3 |
BCE_1391 |
|
| 5 |
1 |
5 |
TTCAAACGACATCTTTAACTGTTTTAATTGGTGTAACTGAAGTTATAAAGGCTGGACAAC |
0 |
BCE0611_1_2 |
BCE_0611 |
|
| 6 |
1 |
6 |
|
1 |
(+)E1A_r60_n9 |
|
--E1A_r60_n9 |
| 7 |
1 |
7 |
|
1 |
(+)Pro25G-02 |
|
--Pro25G |
| 8 |
1 |
8 |
ATCTCAATCGGAATTAAGAAATCAGGATCAAAGTGGATTATGAAATTACTACCACCAATC |
0 |
BCE3935_1_1 |
BCE_3935 |
|
| 10 |
1 |
10 |
ATGAACTTAGAGACACTTACAGAAAAAGAACTTTTAGAAATTTCAGCTGGTGGAGCTGGT |
0 |
BCE0164_1_2a |
BCE_0164 |
|
| 11 |
1 |
11 |
AAAACGGTATGTTAATTGCCTTGGCGGTCATTATCGTATTAGTAATTGGGCCGTTTGTAT |
0 |
BCE_A0048_1_1c |
BCE_A0048 |
|
| 14 |
1 |
14 |
|
1 |
(+)Pro25G-02 |
|
--Pro25G |
| 15 |
1 |
15 |
ATGGCCGAATTACTGTGGCTGACTATTACAAGCGCTTAGGCTTCCAAGAACATGGTGAAA |
0 |
BCE0766_1_2 |
BCE_0766 |
|
| 16 |
1 |
16 |
ATCCTTCATATATCCTCAAAGATATGGTTTGAGAGTCTCTACCGGGTTACCGTAAACAAC |
0 |
sRNA_BCE006_1_1c |
|
--sRNA_BCE006_1_1c |
| 17 |
1 |
17 |
ATTTTAAAAACCTTACATTACACTCAAAACTTATGCTCTCTTCTACTCTAATCATCAATA |
0 |
BCE1423_2_2 |
BCE_1423 |
|
| 18 |
1 |
18 |
GAGGAAGGAAGAAGTTTTATTGTGTCTCATCCAAGTCGCATTTCTCTTGAGCCATTTCCA |
0 |
BCE0517_1_2 |
BCE_0517 |
|
| 19 |
1 |
19 |
GGAAATTTTGAAGAGGAAAGCTGAAAAAGAAGGAATTAAAGTTAAACTGGTTGAGTTCTC |
0 |
BCE0343_1_3 |
BCE_0343 |
|
| 21 |
1 |
21 |
|
1 |
(+)Pro25G-02 |
|
--Pro25G |
| 23 |
1 |
23 |
GGTTTTAGAGAGACCGACGGTTTATTATGTTACAGATGTATATACTCATTTAATAGCAGG |
0 |
BCE0175_1_1 |
BCE_0175 |
|
| 24 |
1 |
24 |
CGTTAAAAGATATTTCTTTTACTGTGAAAAAAAATGAGTTTGTATGTTTATTAGGCCCAA |
0 |
BCE1437_2_1 |
BCE_1437 |
|
| 25 |
1 |
25 |
ATGTACTTGCTTTACTACATAAAACAAATGTTTCTTATGAAAAGTTTGAACATGAACCGG |
0 |
BCE5108_1_2 |
BCE_5108 |
|
| 26 |
1 |
26 |
TCCAAGCACTGGTGTAACGATAGATGAAAAAGTTTGGAAGTACCGTGATGAATATGCAAA |
0 |
BCE0490_1_1 |
BCE_0490 |
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Total number of rows: 18777
Table truncated, full table size 1724 Kbytes.
| Supplementary data files not provided |
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