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Platform GPL7631 Query DataSets for GPL7631
Status Public on Nov 20, 2008
Title Arabidopsis thaliana 11.2k 70-mer spotted oligoprobes
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Arabidopsis thaliana
Manufacturer Operon
Manufacture protocol This oligonucleotide array is produced from the Operon Version 1.0 Array-Ready Oligo set (AROS). The 70-mer oligo was designed from the 3'-end of 26,090 annotated genes. Every 70-mer oligo is spotted once on each slide.
Catalog number V1.0 AROS
Support glass
Coating aminosilane
 
Description 11199 probes were detected to be differentially expressed between leaves of Arabidopsis thaliana and Arabidopsis arenosa
 
Contributor(s) Wang J, Tian L, Lee H, Wei NE, Jiang H, Watson B, Madlung A, Osborn TC, Doerge RW, Comai L, Chen ZJ, Ha M
Citation(s) 16172500
Submission date Nov 12, 2008
Last update date Nov 20, 2008
Contact name Misook Ha
E-mail(s) misook.ha@gmail.com
Phone 7732795900
Organization name National Heart Lung Blood Institute
Lab Laboratory of Epigenome Biology
Street address NIH
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (1) GSM341923
Series (1)
GSE9513 Duplicate genes increase expression diversity in closely related species and allopolyploids

Data table header descriptions
ID
SEQUENCE 70-oligomer nucleotide sequence
Name Genes or Clones that can hybridize with probe
ORF locus ID
SPOT_ID spot identifier

Data table
ID SEQUENCE Name ORF SPOT_ID
A000001_01 AAAGTGGGTAAGACGAGTATGACGGGCACAGCGGTTGGAGTAGATGTAACCGCAGCTCAAAAGATATGGA AT1G58360 AT1G58360
A000010_01 AAAATTCTGGCGTCGTGAGGAGGAAATCTAACGGCGGAGAAAGGTCCGGTATAGTAGTTCCGGCGTTTCA AT1G02450 AT1G02450
A001000_01 CCTCTCAATCTCTTATTTACTATCTTCCGCCCAAACCGAAGCCACCTCAATCGAGAGATTAGTGCCAAGA AT1G02360 AT1G02360
A010003_01 AGCTAAATCGATTGCTTGCGGTGGCCGCCACACTCTTGCCATTGTAGAATGGAAGTCCGATGATATTTGA AT3G02510 AT3G02510
A010007_01 AAACTATCTAAACAGCATGAACCTTGGTCACTTTGGTCATCCCATCCTCTAAGCCTCAAGGTTGGTAATA AT3G10572 AT3G10572
A010009_01 AACATCAAGAGGAGAAACCCTTTTACTCCATCATCTTCACCAAGCCATGACGCTTGCAACGAGCTTCGCA AT3G51910 AT3G51910
A010011_01 AATCTGCTACACCTGTGACTGTAGGAAACGCGGCTACAAAAGTCTCGATTAAGGAATCTCTCAAAAGAGA AT3G06760 AT3G06760
A010012_01 AACCTCCTAGGCTAGTTGGTGTTGCTGTTCACGAACTTGGAGCCATTGGACGGCTGCTTTTCTTTCTGGA AT3G06710 AT3G06710
A010016_01 AATTGCATGCTATATATAATAAAGAAAGAGAGGCTAGGCTCCGGGAAAGTTTATGGGGTGCAGAGGATCA AT3G04460 AT3G04460
A010017_01 ACCTAGCTGCATTGGACCTTACAGTCAGGCCACTTTGCACCAGAGTGTTCTTCACATGGCTGGACAATTA AT3G04480 AT3G04480
A010018_01 CTGTTGGACCGGTTCCTGCCGTCTACGCTTACCCTCAGTACCAACAGGCACATCAATTGTTCCAAAGAGA AT3G04500 AT3G04500
A010019_01 AATCTGAAAATGAATTCAGATCACTATGCTTCATGGATGGTTCACCTTGGTGGAGCTAGGCTGATTACAA AT3G47630 AT3G47630
A010020_01 TGGATACAAATGGTGGCGGCGTGCATACAAATAGAGGCAGTGGATTTTTTCACGATAATCCTCCTTGCAA AT3G05460 AT3G05460
A010021_01 GGGATTGTGTCATGGCCACCAGGTGATCCCATGGGGTGATCTAGACTCACTCGCCATGCTTCAGAGACAA AT3G47810 AT3G47810
A010024_01 ACCACGAGTTTTATACTCGGTTTATCGCCAGGGATAGGCCGGAATCTAAAACTCGACGTCATTTATCCGA AT3G05410 AT3G05410
A010027_01 AACTAGCGGAGTACTTGGCACAGCTTACCCACTTATAATGGCGGCCATATTAGGAATTGGTGATGGAATA AT3G09470 AT3G09470
A001003_01 ATGCAGCAACAAGCACAAGTTCCAATGCCACCTAATGTTAACATGTTCCAGTCAGCACCCCAACCGTTTA AT1G30473 AT1G30473
A010036_01 TCCGGGTCTTCTCCTGGGTTTAGGAAGAGTTCAGGGGTGAAATGTAGAGTTAGGGTTCGTGGATTGATGA AT3G09730 AT3G09730
A010037_01 CACCAACATCGACGGATGCTGTGGCAGAGGGTTCGTCTAAGAAAGTGAGGAAACCATATACCATCACCAA AT3G09600 AT3G09600
A010039_01 AAGAGGTTCAGAATCTCCCTGTGACCCTTCTTCGCATGCAGAATTCTCGGGGTAGTATTGGAGCTCCAGA AT3G09760 AT3G09760

Total number of rows: 11199

Table truncated, full table size 1213 Kbytes.




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