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Platform GPL7025

Query DataSets for GPL7025

Status

Public on Jul 10, 2008

Title

UHN Human 19K cDNA Array SS-H19Kv8 with Unigene Human Build 211

Technology type

spotted DNA/cDNA

Distribution

non-commercial

Organism

Homo sapiens

Manufacturer

University Health Network Microarray Center, Toronto, Ontario

Manufacture protocol

As described on the UHN Microarray Centre website

Support

glass

Description

This set includes 19,200 spots containing 18,981 cDNA clones from the IMAGE consortium and printed on UltraGAPS™ slides. The Single spotted array contains 18,827 characterized and unknown human ESTs. The clone set has been sequence-verified at the Microarray Centre and the sequences can be downloaded for validation.

Web link

http://www.microarrays.ca

Submission date

Jul 07, 2008

Last update date

Jan 17, 2013

Contact name

Dong-Yu Wang

Organization name

UHN-PMH-OCI

Street address

610 University Ave

City

Toronto

ZIP/Postal code

M5G 2M9

Country

Canada

Samples (77)

More...

GSM304870, GSM304871, GSM304872, GSM304873, GSM304874, GSM304875

Series (3)

GSE12072	The effects of timing of fine needle aspiration biopsies on gene expression profiles in breast cancers
GSE12080	Gene expression signature involved in estrogen receptor status and prognosis of breast cancers.
GSE46857	Gene expression profiling of cervical cancer tissues at progressive FIGO defined stages

Data table header descriptions
ID
ORF	Symbol
Description	Gene Official Full Name
GB_ACC	GenBank Accession identifier of the matching sequence
CLONE_ID	IMAGE clone identifier
UNIGENE_ID	GenBank Unigene cluster identifier
GI	GenBank GeneID
GB_ACC	GenBank Reference Sequences identifier
CytoBand	Cytoband for the Unigene cluster
SPOT_ID

Data table
ID	ORF	Description	GB_ACC	CLONE_ID	UNIGENE_ID	GI	GB_ACC	CytoBand	SPOT_ID
UHNhcdna0000001									--UHNhcdna0000001
UHNhcdna0000002	SDF2	Stromal cell-derived factor 2	R15429	53375	Hs.514036	6388	NM_006923	17q11.2
UHNhcdna0000003	TSSC1	Tumor suppressing subtransferable candidate 1	BI771914	5208343	Hs.502770	7260	NM_003310	2p25.3
UHNhcdna0000004	DIS3	DIS3 mitotic control homolog (S. cerevisiae)	R15422	53273	Hs.643464	22894	NM_014953	13q22.1
UHNhcdna0000005	FAM33A	Family with sequence similarity 33, member A	BU181827	6137236	Hs.463607	348235	NM_001100595	17q22
UHNhcdna0000006		Clone 24629 mRNA sequence	AF052160		Hs.475602
UHNhcdna0000007			T65042	21481
UHNhcdna0000008			T65422	21533
UHNhcdna0000009	CDC37L1	Cell division cycle 37 homolog (S. cerevisiae)-like 1	BM021406	5673017	Hs.561954	55664	NM_017913	9p24.1
UHNhcdna0000010			T08163
UHNhcdna0000011	SHANK2	SH3 and multiple ankyrin repeat domains 2	T66098	21575	Hs.268726	22941	NM_012309	11q13.3
UHNhcdna0000012	DUSP6	Dual specificity phosphatase 6	T65624	21815	Hs.298654	1848	NM_001946	12q22-q23
UHNhcdna0000013	WDR13	WD repeat domain 13	BI759214	5182906	Hs.521973	64743	NM_017883	Xp11.23
UHNhcdna0000014			F11799
UHNhcdna0000015	AGTRAP	Angiotensin II receptor-associated protein	T65625	21816	Hs.464438	57085	NM_001040194	1p36.22
UHNhcdna0000016	FNTA	Farnesyltransferase, CAAX box, alpha	T65073	21484	Hs.370312	2339	NM_001018676	8p11
UHNhcdna0000017			T65200	21763
UHNhcdna0000018	MEX3C	Mex-3 homolog C (C. elegans)	T65503	21538	Hs.465144	51320	NM_016626	18q21.2
UHNhcdna0000019	SSTR1	Somatostatin receptor 1	T65201	21764	Hs.248160	6751	NM_001049	14q13
UHNhcdna0000020			T65080	21593

Total number of rows: 18981

Table truncated, full table size 1715 Kbytes.

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML

Supplementary data files not provided