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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Nov 24, 2008 |
| Title |
GenAu mouse chr17 2588 |
| Technology type |
in situ oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Mus musculus |
| Manufacturer |
NimbleGen |
| Manufacture protocol |
as described in www.nimblegen.com
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| |
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| Description |
single copy regions of mouse chr.17 (3021656bp-92867493bp) with custom repeat masking
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| |
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| Contributor(s) |
Pauler FM, Sloane MA, Barlow DP |
| Submission date |
May 02, 2008 |
| Last update date |
Nov 24, 2008 |
| Contact name |
Florian M Pauler |
| E-mail(s) |
florian.pauler@univie.ac.at
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| Phone |
+43 1 4277 54323
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| Fax |
+43 1 42770 9546
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| Organization name |
CeMM
|
| Lab |
Denise P Barlow
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| Street address |
Dr Bohrgasse 9/4
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| City |
Vienna |
| State/province |
Vienna |
| ZIP/Postal code |
A1030 |
| Country |
Austria |
| |
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| Samples (32)
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GSM286012, GSM286013, GSM286014, GSM286016, GSM286018, GSM286020
GSM286021, GSM286022, GSM286023, GSM286024, GSM286025, GSM286026, GSM286027, GSM286028, GSM286029, GSM286030, GSM286043, GSM286044, GSM286045, GSM286046, GSM286047, GSM286084, GSM286085, GSM286219, GSM286220, GSM286227, GSM286228, GSM286241, GSM286242, GSM286243, GSM286244, GSM286245
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| Series (3) |
| GSE11335 |
Chip-chip from MEF cells with H3ac, H4ac, H4K20me1, H3K27me3, H3K9me3, H4K20me3, H3K4me2, H3K4me3 and H3K9ac |
| GSE11337 |
RNA-chip from MEF cells |
| GSE11389 |
Mouse Chromosome 17 Mapping in Two MEF Cell Lines |
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| Data table header descriptions |
| ID |
|
| CHROMOSOME |
Chromosomal location (NCBI mouse build 34) |
| RANGE_GB |
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| RANGE_START |
|
| RANGE_END |
|
| SEQUENCE |
Sequence of oligo |
| SPOT_ID |
|
| Data table |
| ID |
CHROMOSOME |
RANGE_GB |
RANGE_START |
RANGE_END |
SEQUENCE |
SPOT_ID |
| 2588_0001_0001 |
chr17 |
NC_000083.2 |
12304603 |
12304653 |
GCCTGGCCTCCCCAGGGCTGTGTGCCTTCATAGACAGTGGTTTGTATTAT |
|
| 2588_0001_0003 |
chr17 |
NC_000083.2 |
27526676 |
27526726 |
GGTCCATCCCTGCCTTCCTCATCGTGACCCTTCACCTCCCTTCACAGCCT |
|
| 2588_0001_0005 |
chr17 |
NC_000083.2 |
77505956 |
77506006 |
ACCATGGATTGGCCGGAGAAACTTCGGAGCAAGGGAGCAGTTCATCTGAG |
|
| 2588_0001_0007 |
chr17 |
NC_000083.2 |
84997763 |
84997813 |
ACATGGGCAAACAGAAGTATGAAGAGAGCTAAGGGAATGGCTGAGGTAAA |
|
| 2588_0001_0009 |
chr17 |
NC_000083.2 |
62891936 |
62891986 |
CAATAAGATATTCTTTTTCGAGTAATAAGCAAATCCATAAGAAACATGAT |
|
| 2588_0001_0011 |
chr17 |
NC_000083.2 |
21217104 |
21217154 |
TATTTAGAACCAACATCTGGCTAGGTCTGTAACAAGGTATCCTAAGAAGT |
|
| 2588_0001_0013 |
chr17 |
NC_000083.2 |
66223555 |
66223605 |
TACCTAAAATATACAGTGAAAGGAATCTTTTATGGTCAATTGCCTGGGTT |
|
| 2588_0001_0015 |
chr17 |
NC_000083.2 |
4532937 |
4532987 |
GACCCCATCACATGTACAGTGAGACCACACAGCACCTGCTCTCAATGAGT |
|
| 2588_0001_0017 |
chr17 |
NC_000083.2 |
10296233 |
10296283 |
TTTAAAGCAGTTATTTTGTCTGGACTGTGTGACCATTAGATTCACAATGT |
|
| 2588_0001_0019 |
chr17 |
NC_000083.2 |
25279783 |
25279833 |
GGGCAGCCCCCGCTTTTTGCTGCCAGCCTCTTGCTGCAGAAACCTCCACA |
|
| 2588_0001_0021 |
chr17 |
NC_000083.2 |
48630621 |
48630671 |
ATATAGTTGCATATTAGCAAGTACCTAATAACTAGCTTATTAAAATAAGA |
|
| 2588_0001_0023 |
chr17 |
NC_000083.2 |
80842818 |
80842868 |
CTGATAACTATTTTGAGAATCCTCCAGATTATTGCATTTAGCAATAGTTC |
|
| 2588_0001_0025 |
chr17 |
NC_000083.2 |
74623012 |
74623062 |
GGTTATAAATCTAACAAAATGAAAGTTAATATCTGTTCTCTACTACAATG |
|
| 2588_0001_0027 |
chr17 |
NC_000083.2 |
30047747 |
30047797 |
AGCCACCCAGTCAAGCACCTTCAGGGAGTCCTCAGCCAATGCCTGTTTTT |
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| 2588_0001_0029 |
chr17 |
NC_000083.2 |
36967706 |
36967756 |
GAGCCTTGGGAATCGCGGCCACTGCACCTGCTACAGTGGGTAGCTTTACA |
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| 2588_0001_0031 |
chr17 |
NC_000083.2 |
46178847 |
46178897 |
GAGACTGATCCGGAATGGGCAATTATCCCCCAAAGGGATTCTGGGTACAT |
|
| 2588_0001_0033 |
chr17 |
NC_000083.2 |
41433045 |
41433095 |
TACTTGCAATCAGAACAAGTTCTGTCCCAGTCTGCATCTGGCTATAAGGA |
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| 2588_0001_0035 |
chr17 |
NC_000083.2 |
8338712 |
8338762 |
CTCAGAATTATTAATTAGCGCTCCTCAAGGATGGTTTGTTTGCACATCAG |
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| 2588_0001_0037 |
chr17 |
NC_000083.2 |
31744372 |
31744422 |
AGGAGCATCTGAGCCTTAAGAAAGGGATTTTGGGCACCAGGATTTAGATG |
|
| 2588_0001_0039 |
chr17 |
NC_000083.2 |
50932741 |
50932791 |
ATATGGGTGGTGTCCTCAGGCCTGCCAAACATTACTAACTTTCATCATCA |
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Total number of rows: 390547
Table truncated, full table size 39049 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GPL6815.ndf.gz |
15.4 Mb |
(ftp)(http) |
NDF |
| GPL6815.pos.gz |
3.8 Mb |
(ftp)(http) |
POS |
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