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Platform GPL6814 Query DataSets for GPL6814
Status Public on Nov 24, 2008
Title GenAu mouse chr17 2356
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mus musculus
Manufacturer NimbleGen
Manufacture protocol as described in www.nimblegen.com
 
Description single copy regions of mouse chr.17 (3021656bp-92867493bp) with custom repeat masking
 
Contributor(s) Pauler FM, Sloane MA, Barlow DP
Submission date May 02, 2008
Last update date Nov 24, 2008
Contact name Florian M Pauler
E-mail(s) florian.pauler@univie.ac.at
Phone +43 1 4277 54323
Fax +43 1 42770 9546
Organization name CeMM
Lab Denise P Barlow
Street address Dr Bohrgasse 9/4
City Vienna
State/province Vienna
ZIP/Postal code A1030
Country Austria
 
Samples (5) GSM286223, GSM286224, GSM286225, GSM286226, GSM287491
Series (2)
GSE11335 Chip-chip from MEF cells with H3ac, H4ac, H4K20me1, H3K27me3, H3K9me3, H4K20me3, H3K4me2, H3K4me3 and H3K9ac
GSE11389 Mouse Chromosome 17 Mapping in Two MEF Cell Lines

Data table header descriptions
ID
CHROMOSOME Chromosomal location (NCBI mouse build 34)
RANGE_GB
RANGE_START
RANGE_END
SEQUENCE Sequence of oligo
SPOT_ID

Data table
ID CHROMOSOME RANGE_GB RANGE_START RANGE_END SEQUENCE SPOT_ID
2356_0001_0001 chr17 NC_000083.2 4368420 4368470 CAATGGGTTGAGTGGGCAGAGTGAGATGATTTGTTTGGGACTGTGTATTA
2356_0001_0003 chr17 NC_000083.2 84374528 84374578 GGCTCTTGGGAGTCAAGATCTTAATATGTTGCTGCATTGAGTGTCTACAA
2356_0001_0005 chr17 NC_000083.2 33526124 33526174 TTAAGGTCTAATATATGAAATAATGTTAGTTATTATGTGTGAGACGGATG
2356_0001_0007 chr17 NC_000083.2 3381029 3381079 CGAATTCGGGGTTAATACCCACATTTGCTAGCTGTTAATCTCGCAAGATG
2356_0001_0009 chr17 NC_000083.2 80322370 80322420 ACATCTCTCCAATTCTGAGCATCCTGAAAAAGATGCCTATGCAAGGCAGG
2356_0001_0011 chr17 NC_000083.2 42073421 42073471 GAGACAGCTCAGTAGGTCCAGTGCTTGCCACCTAAGCAAGAGGACTTGCG
2356_0001_0013 chr17 NC_000083.2 70869009 70869059 ATTTCACAGCATACCCGCTGAAGCTTTTATCTCTGTGGCTGAGCCCAGGC
2356_0001_0015 chr17 NC_000083.2 44476970 44477020 CCGGTTCTGCTGTAACATGGTGTGTAAGTAGTGTTAACCTTTCTGTACTA
2356_0001_0017 chr17 NC_000083.2 5554060 5554110 TCCTCTGCTGCCTCCGTTCCTGCAGCATATGCTCTACTGTCCAACATCAA
2356_0001_0019 chr17 NC_000083.2 61483012 61483062 ACTGCTATAGAATCAGAGATAAATTATGTGCTTGCGATAATGGAAGAACA
2356_0001_0021 chr17 NC_000083.2 13893785 13893835 ATAGTAATTTCCAACTCCTGTCTCTGGTTACCTGGAACAGGCAAAAGACC
2356_0001_0023 chr17 NC_000083.2 60696226 60696276 GGAGTCATGGGGCACAGTGACCAGGTCTGAGACCCCAGCTGGATGCTGCG
2356_0001_0025 chr17 NC_000083.2 44156566 44156616 TGTGGGAATAAGAGTCAGTGTAATCTTAATTCTCAGCCCCAGGGGTACTC
2356_0001_0027 chr17 NC_000083.2 61260566 61260616 ATTATGAAAAATGATTCACCTTATCAAAGTCTATTCTCACAGCTACAAAG
2356_0001_0029 chr17 NC_000083.2 50814863 50814913 GAATTTTAAGAAGTACATCCTAGCCTTAGCCTATCAGATCCAGCAACATG
2356_0001_0031 chr17 NC_000083.2 61773568 61773618 CAAGGGAGAGATACGGTTCTGACAGGCATGATGTAAACAGCTAGGAGCAA
2356_0001_0033 chr17 NC_000083.2 64396758 64396808 ACCGTCTCCCATTTTAGAGATGGCCAGGTGTGGGAGACCTTGAAATAGGT
2356_0001_0035 chr17 NC_000083.2 75962186 75962236 CTTGGTAGGACTTGTCAAATTCTTTGTCGTAAATATGTATCTTACAGTCC
2356_0001_0037 chr17 NC_000083.2 90710862 90710912 CTTAATTAGATATTGATTGGGTATGGTAAAGACCATGTGAATTGTGCAGT
2356_0001_0039 chr17 NC_000083.2 26931169 26931219 CTTGTGAGAGAGATTTTCGAGACAGGTCTCTCTATGTAGCACCGTTTGGT

Total number of rows: 389641

Table truncated, full table size 38847 Kbytes.




Download family Format
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Supplementary file Size Download File type/resource
GPL6814.ndf.gz 15.4 Mb (ftp)(http) NDF
GPL6814.pos.gz 3.8 Mb (ftp)(http) POS

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