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Platform GPL6458 Query DataSets for GPL6458
Status Public on May 01, 2008
Title Agilent_human_1A_22k
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol In situ synthesized 60-mer oligos
 
 
Submission date Feb 05, 2008
Last update date Jan 18, 2013
Contact name Ivana V Yang
E-mail(s) yangi@njhealth.org
Phone 303-270-2589
Fax 303-270-2136
Organization name National Jewish Health
Department Medicine
Street address 1400 Jackson Street
City Denver
State/province CO
ZIP/Postal code 80206
Country USA
 
Samples (18) GSM262571, GSM262574, GSM262743, GSM262744, GSM262745, GSM262746 
Series (1)
GSE10394 INDUCTION OF OXIDATIVE STRESS AND METAL BINDING GENES IN HUMAN ALVEOLAR MACROPHAGES EXPOSED TO FINE PARTICLES

Data table header descriptions
ID
Row
Column
Name
Probe ID
RefNumber
ControlType
GeneName
ORF
TopHit
Description
Systematic Name
GB_ACC
UniGene ID
GENE Entrez GENE ID
Gene Symbol & Name
SPOT_ID

Data table
ID Row Column Name Probe ID RefNumber ControlType GeneName ORF TopHit Description Systematic Name GB_ACC UniGene ID GENE Gene Symbol & Name SPOT_ID
1 1 1 Pro25G (+)Pro25G-03 22575 pos Pro25G --POSITIVE_CTRL: Pro25G
2 1 2 Pro25G (+)Pro25G-03 22360 pos Pro25G --POSITIVE_CTRL: Pro25G
3 1 3 NegativeControl (-)3xSLv1 22145 neg NegativeControl --NEGATIVE_CTRL: (-)3xSLv1
4 1 4 21930 ignore --UNKNOWN
5 1 5 I_961698 A_23_P6025 21715 FALSE RAE1 RAE1 SP:P78406 RAE1 RNA export 1 homolog (S. pombe), an RNA-binding protein that likely functions in the nuclear export of mRNA, binds microtubules and may be involved in cytoskeletal attachment of mRNPs and their cytoplasmic transport I_961698 U84720 Hs.371698 8480 RAE1; RAE1 RNA export 1 homolog (S. pombe)
6 1 6 I_1000256 A_23_P60243 21500 FALSE MGC3079 MGC3079 GP:AAH01030.1 Protein with high similarity to phosphatidylinositol glycan class O (mouse Pigo), which plays a role in glycosylphosphatidylinositol (GPI) anchor biosynthesis by adding phosphoethanolamine to the third mannose residue of GPI I_1000256 BC001030 Hs.522099 84720 PIGO; phosphatidylinositol glycan, class O
7 1 7 I_1109106 A_23_P35277 21285 FALSE I_1109106 GP:BAB21838.1 Protein with high similarity to deleted in bladder cancer chromosome region candidate 1 (human DBCCR1), which is a cell cycle regulator that inhibits cell growth and proliferation and is associated with bladder cancer and aging of normal urothelium I_1109106 BC028036 Hs.495918 57795 FAM5B; family with sequence similarity 5, member B
8 1 8 I_1201837 A_23_P113070 21070 FALSE SORCS3 SORCS3 GP:BAA83011.2 Protein containing twelve BNR repeats and four polycystic kidney disease protein (PKD) domains, which may be structurally similar to Ig domains, has a region of low similarity to a region of sortilin-related receptor (human SORL1) I_1201837 AB028982 Hs.348526 22986 SORCS3; sortilin-related VPS10 domain containing receptor 3
9 1 9 I_961842 A_23_P109193 20855 FALSE I_961842 SP:Q9H115 Protein with strong similarity to NSF attachment protein alpha component of the docking-fusion particle (rat Napa), which is involved in Ca2+-regulated membrane fusion at the priming stage, contains a aromatic-di-alanine (AdAR) repeat domain I_961842 AK022817 Hs.269471 63908 NAPB; N-ethylmaleimide-sensitive factor attachment protein, beta
10 1 10 I_960224 A_23_P78112 20640 FALSE ALDOC ALDOC SP:P09972 Aldolase C (fructose-bisphosphate aldolase C), a brain-specific glycolytic enzyme that converts fructose-1,6-bisphosphate into dihydroxyacetonephosphate and glyceraldehyde-3-phosphate I_960224 BC003613 Hs.155247 230 ALDOC; aldolase C, fructose-bisphosphate
11 1 11 I_962288 A_23_P62136 20425 FALSE PQBP1 PQBP1 GP:BAA76400.1 Polyglutamine binding protein 1, a transcription activator that binds single-stranded DNA and to polyglutamine tracts of several proteins, plays a role in transcription regulation and possibly in ubiquitination, cell cycle control, and RNA splicing I_962288 AB016533 Hs.534384 10084 PQBP1; polyglutamine binding protein 1
12 1 12 I_963801 A_23_P33247 20210 FALSE APC7 APC7 GP:AAF05754.1 Anaphase-promoting complex subunit 7, a subunit of the anaphase promoting complex, contains tetratrico peptide repeats, may facilitate ubiquitin-mediated cyclin degradation, may regulate the metaphase-anaphase transition and exit from mitosis I_963801 BC009498 Hs.529280 51434 ANAPC7; anaphase promoting complex subunit 7
13 1 13 I_962833 A_23_P215269 19995 FALSE GNA12 GNA12 SP:Q03113 G protein alpha subunit 12, a component of pertussis toxin insensitive heterotrimeric G protein complexes, transduces signals through Ras, Rac, and Rho monomeric GTPases, activates ERK and JNK pathways, involved in cell growth and cytoskeletal regulation I_962833 AF493901 Hs.487341 2768 GNA12; guanine nucleotide binding protein (G protein) alpha 12
14 1 14 I_929053 A_23_P23173 19780 FALSE FLJ12553 FLJ12553 GP:BAB14134.1 Protein containing a forkhead associated (FHA) domain, which bind phosphopeptides, has high similarity to uncharacterized C. elegans C32E8.5 I_929053 AK022615 Hs.471951 79753 SNIP1; Smad nuclear interacting protein
15 1 15 I_1110078 A_23_P96445 19565 FALSE I_1110078 GP:AAH30686.1 Protein of unknown function I_1110078 AF093250 Hs.435815 55578 FAM48A; family with sequence similarity 48, member A
16 1 16 eQC (+)eQC-37 19350 pos eQC --POSITIVE_CTRL: eQC
17 1 17 I_935752 A_23_P116057 19135 FALSE HSU79266 HSU79266 GP:AAB50210.1 Member of the SAC3 and GANP family, has a region of moderate similarity to a region of minichromosome maintenance deficient 3 associated protein (mouse Mcm3ap), which is a DNA primase that interacts with the replication protein mouse Mcmd I_935752 U79266 Hs.23642 29901 SAC3D1; SAC3 domain containing 1
18 1 18 I_960336 A_23_P208029 18920 FALSE DSC3 DSC3 SP:Q14574 Desmocollin 3 (desmocollin 4), a member of the cadherin family of adhesive glycoproteins found in desmosomes I_960336 X83929 Hs.41690 1825 DSC3; desmocollin 3
19 1 19 I_1109918 A_23_P96809 18705 FALSE DKFZp566H0824 DKFZp566H0824 GP:CAB43372.1 Protein of unknown function I_1109918 AL050271 Hs.549167 54744 DKFZp566H0824; hypothetical protein DKFZp566H0824
20 1 20 I_963562 A_23_P251142 18490 FALSE BAIAP2 BAIAP2 GP:BAA36587.1 Brain-specific angiogenesis inhibitor 1-associated protein 2, interacts with cytoplasmic portion of BAI1, may be a substrate for INSR, involved in cytoskeletal organization and lamellipodia and filopodia formation I_963562 AB015020 Hs.128316 10458 BAIAP2; BAI1-associated protein 2

Total number of rows: 22575

Table truncated, full table size 5866 Kbytes.




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