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Status
Public on Aug 24, 2007
Title
Affymetrix GeneChip Human Genome U133 Plus 2.0 Array [CDF: Hs133P_Hs_REFSEQ_8]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens Manufacturer
Affymetrix
Manufacture protocol
see manufacturer's web site
Description
This is identical to GPL570 but a custom CDF environment was used to extract data. The custom CDF (Hs133P_Hs_REFSEQ_8) was described by Dai et al., NAR 2005 33(20), PMID: 16284200. The cdf can be found at the link below.
Web link
http://brainarray.mbni.med.umich.edu/Brainarray/Database/CustomCDF/genomic_curated_CDF.asp Submission date
Aug 21, 2007
Last update date
Aug 24, 2007
Contact name
Huan Xu
E-mail(s)
huan.xu@cchmc.org Organization name
Cincinnati Children's Hospital Medical Center
Department
Biomedical Informatics
Street address
3333 Burnet Ave.
City
Cincinnati
State/province
OH
ZIP/Postal code
45229
Country
USA
Samples (114)
GSM244745 , GSM244746 , GSM244747 , GSM244748 , GSM244749 , GSM244750
GSM244751 ,
GSM244752 ,
GSM244753 ,
GSM244754 ,
GSM244755 ,
GSM244756 ,
GSM244757 ,
GSM244758 ,
GSM244759 ,
GSM244760 ,
GSM244761 ,
GSM244762 ,
GSM244763 ,
GSM244764 ,
GSM244765 ,
GSM244766 ,
GSM244767 ,
GSM244768 ,
GSM244769 ,
GSM244770 ,
GSM244771 ,
GSM244772 ,
GSM244773 ,
GSM244774 ,
GSM244775 ,
GSM244776 ,
GSM244777 ,
GSM257428 ,
GSM257429 ,
GSM257430 ,
GSM257431 ,
GSM257432 ,
GSM257433 ,
GSM257434 ,
GSM257435 ,
GSM257436 ,
GSM257437 ,
GSM257438 ,
GSM257439 ,
GSM257440 ,
GSM257441 ,
GSM257442 ,
GSM257443 ,
GSM257444 ,
GSM257445 ,
GSM257446 ,
GSM257447 ,
GSM257448 ,
GSM257449 ,
GSM257450 ,
GSM267527 ,
GSM267528 ,
GSM267529 ,
GSM267530 ,
GSM267531 ,
GSM267532 ,
GSM267533 ,
GSM267534 ,
GSM267535 ,
GSM267536 ,
GSM267537 ,
GSM267538 ,
GSM267539 ,
GSM267540 ,
GSM267541 ,
GSM267542 ,
GSM267543 ,
GSM267544 ,
GSM267545 ,
GSM267546 ,
GSM267547 ,
GSM267548 ,
GSM267549 ,
GSM267550 ,
GSM267551 ,
GSM267552 ,
GSM267553 ,
GSM267554 ,
GSM267555 ,
GSM267556 ,
GSM267557 ,
GSM267558 ,
GSM267559 ,
GSM267560 ,
GSM267561 ,
GSM267562 ,
GSM267563 ,
GSM267564 ,
GSM267565 ,
GSM267566 ,
GSM267567 ,
GSM267568 ,
GSM267569 ,
GSM267570 ,
GSM267571 ,
GSM267572 ,
GSM267573 ,
GSM267574 ,
GSM267575 ,
GSM267576 ,
GSM267577 ,
GSM267578 ,
GSM267579 ,
GSM267580 ,
GSM267581 ,
GSM267582 ,
GSM267583 ,
GSM267584 Series (3)
GSE9686 Human colon expression in healthy, CD, treated CD, and UC
GSE10191 Human colon expression in healthy controls and UC
GSE10616 Human colon expression in healthy controls, colon-only CD, ileo-colonic CD, and UC
Relations Alternative to
GPL570 (Alternative CDF[official])
Data table header descriptions ID GB_ACC RefSeq ID
DESCRIPTION Gene Description
Data table ID GB_ACC DESCRIPTION NM_000014_at
NM_000014 alpha-2-macroglobulin
NM_000015_at
NM_000015 N-acetyltransferase 2 (arylamine N-acetyltransferase)
NM_000016_at
NM_000016 acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain
NM_000017_at
NM_000017 acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain
NM_000018_at
NM_000018 acyl-Coenzyme A dehydrogenase, very long chain
NM_000019_at
NM_000019 acetyl-Coenzyme A acetyltransferase 1 (acetoacetyl Coenzyme A thiolase)
NM_000020_at
NM_000020 activin A receptor type II-like 1
NM_000021_at
NM_000021 presenilin 1 (Alzheimer disease 3)
NM_000022_at
NM_000022 adenosine deaminase
NM_000023_at
NM_000023 sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
NM_000024_at
NM_000024 adrenergic, beta-2-, receptor, surface
NM_000025_at
NM_000025 adrenergic, beta-3-, receptor
NM_000026_at
NM_000026 adenylosuccinate lyase
NM_000027_at
NM_000027 aspartylglucosaminidase
NM_000028_at
NM_000028 amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (glycogen debranching enzyme, glycogen storage disease type III)
NM_000029_at
NM_000029 angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
NM_000030_at
NM_000030 alanine-glyoxylate aminotransferase (oxalosis I; hyperoxaluria I; glycolicaciduria; serine-pyruvate aminotransferase)
NM_000031_at
NM_000031 aminolevulinate, delta-, dehydratase
NM_000032_at
NM_000032 aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia)
NM_000033_at
NM_000033 ATP-binding cassette, sub-family D (ALD), member 1
26121 1865 Kbytes .Supplementary file Size Download File type/resource GPL5760_hs133phsrefseq8cdf_8.0.0.tar.gz
2.9 Mb
(ftp) (http) TAR
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