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Platform GPL4873 Query DataSets for GPL4873
Status Public on Feb 17, 2007
Title Ramaciotti Centre Saccharomyces cerevisiae 13K MWGSc6Kv2
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Saccharomyces cerevisiae
Manufacturer Ramaciotti Centre for gene Function Analysis, University of New South Wales, Sydney, Australia
Manufacture protocol Single stranded (sense) 40mer oligonucleotides were obtained from MWG, diluted and spotted onto glass Eppendorf Creative Oligo Chips using a 24 pin ESI scanner. A total of 13824 features were spotted onto 120 slides within a run where 24 subarrays were added (6x4) with each containing 24 vertical by 24 horizontal features. Features are 100 microns in diameter and attached via an amino-epoxide bond with a separation size of 180 microns.
Support glass
Coating other
 
Description The Platform data table reflects a condensed representation of the duplicate array features.
The full array layout (GPL4873_complete_layout.txt) is linked as a supplementary file at the foot of this record.
 
Contributor(s) Beckhouse AG, Grant CM, Rogers PJ, Dawes IW, Higgins VJ
Citation(s) 15183192
Submission date Feb 14, 2007
Last update date Jan 18, 2013
Contact name Anthony G. Beckhouse
E-mail(s) a.beckhouse@griffith.edu.au
Organization name Ramaciotti Centre for Gene Function Analysis
Department BABS
Lab Dawes
Street address High St
City Randwick
State/province NSW
ZIP/Postal code 2052
Country Australia
 
Samples (30) GSM172052, GSM172053, GSM172055, GSM172057, GSM172058, GSM172059 
Series (3)
GSE7140 Transcriptional response of S.cerevisiae to aeration after anaerobic growth
GSE20590 Effects of Ethanol Stress on Gene Expression in Saccharomyces cerevisiae
GSE21120 Expression Differences in Ethanol Stress Response Between Saccharomyces cerevisiae Parent W303-1A Strain and its Two Ethanol Tolerant Mutants

Data table header descriptions
ID
ORF systematic name
COMMON standard gene name

Data table
ID ORF COMMON
1 YAL001C TFC3
2 YAL002W VPS8
3 YAL003W EFB1
4 YAL004W
5 YAL005C SSA1
6 YAL007C ERP2
7 YAL008W FUN14
8 YAL009W SPO7
9 YAL010C MDM10
10 YAL011W
11 YAL012W CYS3
12 YAL013W DEP1
13 YAL014C
14 YAL015C NTG1
15 YAL016W TPD3
16 YAL017W FUN31
17 YAL018C
18 YAL019W FUN30
19 YAL020C ATS1
20 YAL021C CCR4

Total number of rows: 6495

Table truncated, full table size 105 Kbytes.






Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL4873_complete_layout.txt.gz 90.8 Kb (ftp)(http) TXT

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