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Platform GPL3936 Query DataSets for GPL3936
Status Public on Jul 08, 2006
Title Carnegie Xenopus laevis 22k Micorarray v2
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Xenopus laevis
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site
 
 
Submission date Jun 28, 2006
Last update date Mar 09, 2007
Contact name Biswajit Das
E-mail(s) dasbiswa@mail.nih.gov
Organization name National Institutes of Health/National Institute of Child Health and Human Development
Department Laboratory of Gene Regulation and Development
Lab Section on Molecular Morphogenesis
Street address 18 Library Drive, Building 18T, Room 106
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (21) GSM118367, GSM118368, GSM118369, GSM118440, GSM118441, GSM118442 
Series (3)
GSE5249 Profiling limb muscle degeneration by inducible dominant negative thyroid hormone receptor transgene over-expression
GSE16018 Thyroid Hormone (TH) Controls The Remodeling Of The Pancreas And The Liver, Part C
GSE16075 Thyroid Hormone (TH) Controls The Remodeling Of The Pancreas And The Liver

Data table header descriptions
ID Feature Number
OLIGO_NAME Probe Name
GB_ACC GenBank accession list
SPOT_ID Alternative ID for control spots
SEQUENCE Nucleotide sequence of the oligo used
CONTROL_TYPE -1:negative control, +1:positive control

Data table
ID OLIGO_NAME GB_ACC SPOT_ID SEQUENCE CONTROL_TYPE
1 Pro25G_T10_Pro25G Pro25G_T10_Pro25G ATCATCGTAGCTGGTCAGTGTATCCTTTTTTTTTTATCATCGTAGCTGGTCAGTGTATCC 1
2 (-)3xSLv1 3xSLv1 GCTAGCGAAAGCTAGCTTTTCGATCGGAAACGATCGTTTTCCAGTGACGAAAGTCACTGG -1
3 BU915259_845 BU915259 AGTCTTCCATGCATGTCACGTCTGCAAAGAACAACCCCACACATACAGGGATTTACAGAT
4 BG811599_443 BG811599 AGAGCTGACACTCTATATTGCTGGAAGAGTTTCATGTGAAAGTGGTGGTTCACCTTTAAG
5 CD255638_1002 CD255638 TAAAAATTAACGGAGTCCCCCACTTTGTCGTTTCGGATGGCCCATGGCCCTATATAAAAA
6 r60_n9 r60_n9 AGTGGTTCTACGAAAAACTGGCAGTCAAAAGAAAGGAGGTTATTGCCAGATAAAATGGGG 1
7 Pro25G_EQCP1_T5 Pro25G_EQCP1_T5 ATCATCGTAGCTGGTCAGTGTATCCGGTCAGTGTATCCAGTTTCTCCGAATTTTT 1
8 BG514375_408 BG514375 TTGGATTTGACTTAAACAAAATGATACATTTCTACGGCCCCCATACGCAACAAATTAGAC
9 CA793855_829 CA793855 CGCAGCGGAATTTAGGTTTGTCAGCATGAGCTAAAAATTATTTTCTCACCCGGACAATTG
10 CB592100_583 CB592100 TCGTGGCACCACAAGTTGCCCGTCACCACTTTCTTGCAGGAATCCTGGTATTTTAAAAAA
11 BU914886_408 BU914886 GAGCCAGCCTTTTAACATGAATATCCAGAATATGTGCCTATTTATAGAGCCCACATGCAG
12 CA987354_832 CA987354 AAATGGTTTTGGGGCCCCGGAACCCCAAGGGGGACACTTTATTTCCCCTGGCCACGAAAA
13 AI031277_247 AI031277 TAAGAGCCGGCCCATGTAAATGTAGGTAACATTATAATGGGTTTGTATGCTTTGTATTGG
14 Pro25G_EQCP1_T5 Pro25G_EQCP1_T5 ATCATCGTAGCTGGTCAGTGTATCCGGTCAGTGTATCCAGTTTCTCCGAATTTTT 1
15 CA983340_864 CA983340 AATTTGGTTGGAAAATCTGGGCAGAACATATTTTAATGGGGGGCAGTGGCAAATAATAAA
16 CD101001_703 CD101001 TACAATCCGGTTTTTTCCCTTTCCCCTAAATTTTTTGGGGTTTGAAAGCCATTCCCAGTG
17 X83503_1909 X83503 TTAAAGGGACATATACCCGAACATCTAAATTAAAGAAGAACCTCATAACACTATGTTGGG
18 BI448457_53 BI448457 AATATCAGGATTAATTGAAAATGACTTTCGTACATACACACCTTTCAGCTTTACATTAGA
19 BI937324_256 BI937324 GTGTAAATATAAGTGAAGGAGCTCAGTAGCATGGAGAGTATATAGTCTTGGAACATGGCT
20 AW644294_460 AW644294 TGATCTTTTGTGTATGTAATCTGATTTTGTGTAAGCTGATTTCACTGGCAGTTAAGCTGA

Total number of rows: 22575

Table truncated, full table size 1988 Kbytes.






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