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Status
Public on Aug 16, 2024
Title
Agilent-085739 50007725_QG 085738 Quercus glauca
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Quercus glauca Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Arrays of this design have barcodes that begin with 16085739 or 2585739.
Submission date
Aug 16, 2022
Last update date
Aug 16, 2024
Contact name
Akiko Satake
E-mail(s)
akiko.satake@kyudai.jp Organization name
Kyushu University
Street address
Motooka 744
City
Fukuoka
ZIP/Postal code
819-0395
Country
Japan
Samples (72)
GSM6468259 , GSM6468260 , GSM6468261 , GSM6468262 , GSM6468263 , GSM6468264
GSM6468265 ,
GSM6468266 ,
GSM6468267 ,
GSM6468268 ,
GSM6468269 ,
GSM6468270 ,
GSM6468271 ,
GSM6468272 ,
GSM6468273 ,
GSM6468274 ,
GSM6468275 ,
GSM6468276 ,
GSM6468277 ,
GSM6468278 ,
GSM6468279 ,
GSM6468280 ,
GSM6468281 ,
GSM6468282 ,
GSM6468283 ,
GSM6468284 ,
GSM6468285 ,
GSM6468286 ,
GSM6468287 ,
GSM6468288 ,
GSM6468289 ,
GSM6468290 ,
GSM6468291 ,
GSM6468292 ,
GSM6468293 ,
GSM6468294 ,
GSM6468295 ,
GSM6468296 ,
GSM6468297 ,
GSM6468298 ,
GSM6468299 ,
GSM6468300 ,
GSM6468301 ,
GSM6468302 ,
GSM6468303 ,
GSM6468304 ,
GSM6468305 ,
GSM6468306 ,
GSM6468307 ,
GSM6468308 ,
GSM6468309 ,
GSM6468310 ,
GSM6468311 ,
GSM6468312 ,
GSM6468313 ,
GSM6468314 ,
GSM6468315 ,
GSM6468316 ,
GSM6468317 ,
GSM6468318 ,
GSM6468319 ,
GSM6468320 ,
GSM6468321 ,
GSM6468322 ,
GSM6468323 ,
GSM6468324 ,
GSM6468325 ,
GSM6468326 ,
GSM6468327 ,
GSM6468328 ,
GSM6468329 ,
GSM6468330 Series (2)
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
NAME NAME
SPOT_ID Spot identifier
CONTROL_TYPE Control type
REFSEQ RefSeqAccession
GB_ACC GenBankAccession
LOCUSLINK_ID LocuslinkID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ENSEMBL_ID EnsemblID
TIGR_ID TIGRID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE REFSEQ GB_ACC LOCUSLINK_ID GENE_SYMBOL GENE_NAME UNIGENE_ID ENSEMBL_ID TIGR_ID ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION GO_ID SEQUENCE 1
192
328
GE_BrightCorner
GE_BrightCorner
pos
2
192
326
DarkCorner
DarkCorner
pos
3
192
324
DarkCorner
DarkCorner
pos
4
192
322
arakashi39625
arakashi39625
FALSE
ALDH2B4
AT3G48000.1
TRINITY_DN93023_c0_g1_i1_rc|ens|AT3G48000.1
unmapped
Aldehyde dehydrogenase family 2 member B4, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SU63]
TGTTACTCCCCTGAAGAATCCAGCGTGGCTGTAATACCTTTAATTTTCCATACCGATGCT
5
192
320
arakashi17172
arakashi17172
FALSE
RH22
AT1G59990.1
TRINITY_DN88529_c0_g1_i1|ens|AT1G59990.1
unmapped
DEAD-box ATP-dependent RNA helicase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q944S1]
GTTCTAGCATAAAATGATTAGATTGTGAGGAACTTGGTATGTAAGGAAGCATAACTTGTC
6
192
318
arakashi03211
arakashi03211
FALSE
MDN1
AT1G67120.1
TRINITY_DN104332_c0_g1_i9|ens|AT1G67120.1
unmapped
ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding [Source:TAIR;Acc:AT1G67120]
GGAGGGAATAAATTTGTTGGATTGAAGAGTTCAGTGTGACACAATTGACTTGTAGATGTG
7
192
316
arakashi33753
arakashi33753
FALSE
AT1G12020.1
TRINITY_DN89524_c0_g1_i2_rc|ens|AT1G12020.1
unmapped
F12F1.11 [Source:UniProtKB/TrEMBL;Acc:O65377]
TTTTGACCATGAAGAAACTGTATCGCAGAGGCACAGTTCATCCGTCACCACCAATCACAT
8
192
314
arakashi14304
arakashi14304
FALSE
AT2G35920.1
TRINITY_DN94714_c0_g1_i1|ens|AT2G35920.1
unmapped
RNA helicase family protein [Source:TAIR;Acc:AT2G35920]
CATAGGAGGCACAAAAGGCTCATGCTCTTTCTTATTAATGATAATATCAAAATCCAAGAC
9
192
312
arakashi23910
arakashi23910
FALSE
PSD
AT1G72560.1
TRINITY_DN101397_c0_g1_i1_rc|ens|AT1G72560.1
unmapped
Exportin-T [Source:UniProtKB/Swiss-Prot;Acc:Q7PC79]
CCCCCCACAATTGTTGTAACTATGAATTATTAAGTTTTGGTACTTAGTTTTCTCTTCCCA
10
192
310
arakashi32625
arakashi32625
FALSE
MYB15;;AtMYB41
AT3G23250.2
TRINITY_DN2743_c0_g1_i1_rc|ens|AT3G23250.2|ens|AT4G28110.2
unmapped
Transcription factor MYB15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC4];;MYB41 [Source:UniProtKB/TrEMBL;Acc:A0A178V452]
CCAATGAAGCTTACCAGCATGATGCTAATATAGCTAGGAAAACAGAAACTGACAATTCTG
11
192
308
arakashi12225
arakashi12225
FALSE
HISN1B
AT1G09795.1
TRINITY_DN99158_c1_g2_i1|ens|AT1G09795.1
unmapped
ATP phosphoribosyltransferase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GSJ1]
CTTGTTTCTCCTTTGACCTACATTTTTGATGAAGAGACTCCAAGATGGCGCGAGCTTCTC
12
192
306
arakashi24115
arakashi24115
FALSE
PERK8
AT5G38560.1
TRINITY_DN102355_c4_g1_i1_rc|ens|AT5G38560.1
unmapped
Proline-rich receptor-like protein kinase PERK8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFW5]
GTACCATGCTATGACAAAGGATTTGTGTCAGAAATCTTACATACAACAAGATCAAAGAGA
13
192
304
arakashi10463
arakashi10463
FALSE
TRINITY_DN98794_c0_g1_i7
unmapped
.
AGAAAAATGTAGAGCTGGCCAAGGAGGAAAAGTTGTTCGATTCATGCCAGATTCTCGGCT
14
192
302
arakashi21255
arakashi21255
FALSE
AT3G59680.2
TRINITY_DN52667_c0_g2_i1|ens|AT3G59680.2
unmapped
Serine/Threonine-kinase [Source:UniProtKB/TrEMBL;Acc:F4J9E8]
CTCGGGTTTTCCTCAATAGGAGAACTGGATAATGCCATTAAACTATAATGTTTTTGGATA
15
192
300
arakashi02271
arakashi02271
FALSE
AT2G47690.1
TRINITY_DN167453_c0_g1_i1|ens|AT2G47690.1
unmapped
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A [Source:UniProtKB/Swiss-Prot;Acc:O82238]
AAGGTCAAGTGCGCACCCGTACTCGAAGACTACTACGAGTGCCTGCATCACCGGAAAGAG
16
192
298
arakashi09009
arakashi09009
FALSE
BBR
AT3G19910.1
TRINITY_DN72587_c0_g1_i1|ens|AT3G19910.1
unmapped
E3 ubiquitin ligase BIG BROTHER-related [Source:UniProtKB/Swiss-Prot;Acc:Q9LT17]
TTTATTGAATTGCCGAGCATAGTAGCAAAGTTTTTATTGGATCTTTGATGGTAACCCCCG
17
192
296
arakashi07173
arakashi07173
FALSE
PHB2
AT1G03860.2
TRINITY_DN142397_c0_g1_i1|ens|AT1G03860.2
unmapped
PHB2 [Source:UniProtKB/TrEMBL;Acc:A0A178WBG3]
GAGCGGCCCGATTCAACATCTTGCTTGATGATGTTTCGCTCACGCATCTCGCCTTCTCCC
18
192
294
arakashi37016
arakashi37016
FALSE
TRINITY_DN92751_c0_g1_i2_rc
unmapped
.
AGGAACGCTTAGCGTCGACATTGATTTGTGCTCTCTCTCTCTCTCTCTTTCTTCAACCTT
19
192
292
arakashi14830
arakashi14830
FALSE
PAT10
AT3G51390.1
TRINITY_DN84494_c0_g1_i1|ens|AT3G51390.1
unmapped
Protein S-acyltransferase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q7XA86]
GTGACAAACTCTTGCATTTTGAACATCTTCTAGAGTGATTGTATACATGGAAGGATGTTT
20
192
290
arakashi04985
arakashi04985
FALSE
WAK3
AT1G21240.2
TRINITY_DN102404_c0_g1_i8|ens|AT1G21240.2
unmapped
Wall-associated receptor kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMN8]
AATTTGGCACATGGATGAAGGAACATGCACTGCCACTGAAAATGTCTTGGTGGTATTCTC
62976 15100 Kbytes .Supplementary file Size Download File type/resource GPL32573_Arraydesign_Q.glauca.txt.gz
4.1 Mb
(ftp) (http) TXT
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