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Platform GPL26801 Query DataSets for GPL26801
Status Public on Jun 30, 2019
Title LC Sciences Sus scrofa miRNA array MRA-1013_miRPig_21
Technology type in situ oligonucleotide
Distribution commercial
Organism Sus scrofa
Manufacturer LC Sciences
Manufacture protocol Arrays are made based µParaflo microfluidic technology (Atactic Technologies). On the µParaflo microfluidic chip, each detection probe consists of a chemically modified nucleotide coding segment complementary to target microRNA (from miRBase, http://miRBase.org) or other RNA (control or customer defined sequences) and a spacer segment of polyethylene glycol to extend the coding segment away from the substrate. The detection probes are made by in situ synthesis using PGR (photogenerated reagent) chemistry.
Catalog number MRA-1013
 
Description MRA-1013_miRPig_21
 
Submission date Jun 19, 2019
Last update date Jun 30, 2019
Contact name Marina Arenas-Padilla
E-mail(s) maarepadi@gmail.com
Organization name Centro de Investigación en Alimentación y Desarrollo A. C.
Street address Carretera Gustavo Enrique Astiazarán Rosas 46
City Hermosillo
State/province Sonora
ZIP/Postal code 83304
Country Mexico
 
Samples (3) GSM3897865, GSM3897866, GSM3897867
Series (1)
GSE132995 miRNAs expression in swine monocytes stimulated with Bifidobacterium animalis ssp. lactis Bb12

Data table header descriptions
ID
SEQUENCE Target Seq (5' to 3')
Group
miRNA_ID Reporter BioSequence Database Entry[mirna]
Comment
Reporter Source
miRBase Accession No.
SPOT_ID

Data table
ID SEQUENCE Group miRNA_ID Comment Reporter Source miRBase Accession No. SPOT_ID
ssc-let-7a UGAGGUAGUAGGUUGUAUAGUU experimental ssc-let-7a mature miRNA standard MIMAT0013865 ssc-let-7a
ssc-let-7c UGAGGUAGUAGGUUGUAUGGUU experimental ssc-let-7c mature miRNA standard MIMAT0002151 ssc-let-7c
ssc-let-7d-3p CUAUACGACCUGCUGCCUUUCU experimental ssc-let-7d-3p mature miRNA standard MIMAT0025357 ssc-let-7d-3p
ssc-let-7d-5p AGAGGUAGUAGGUUGCAUAGUU experimental ssc-let-7d-5p mature miRNA standard MIMAT0025356 ssc-let-7d-5p
ssc-let-7e UGAGGUAGGAGGUUGUAUAGUU experimental ssc-let-7e mature miRNA standard MIMAT0013866 ssc-let-7e
ssc-let-7f UGAGGUAGUAGAUUGUAUAGUU experimental ssc-let-7f mature miRNA standard MIMAT0002152 ssc-let-7f
ssc-let-7g UGAGGUAGUAGUUUGUACAGUU experimental ssc-let-7g mature miRNA standard MIMAT0013867 ssc-let-7g
ssc-let-7i UGAGGUAGUAGUUUGUGCU experimental ssc-let-7i mature miRNA standard MIMAT0002153 ssc-let-7i
ssc-miR-1 UGGAAUGUAAAGAAGUAUGUA experimental ssc-miR-1 mature miRNA standard MIMAT0010187 ssc-miR-1
ssc-miR-7 UGGAAGACUAGUGAUUUUGUUGUU experimental ssc-miR-7 mature miRNA standard MIMAT0002141 ssc-miR-7
ssc-miR-9-1 UCUUUGGUUAUCUAGCUGUAUGA experimental ssc-miR-9-1 mature miRNA standard "MIMAT0002168,MIMAT0002169" "ssc-miR-9-1, ssc-miR-9-2"
ssc-miR-9 UCUUUGGUUAUCUAGCUGUAUG experimental ssc-miR-9 mature miRNA standard MIMAT0025358 ssc-miR-9
ssc-miR-10a-3p CAAAUUCGUAUCUAGGGGAAU experimental ssc-miR-10a-3p mature miRNA standard MIMAT0022954 ssc-miR-10a-3p
ssc-miR-10a-5p UACCCUGUAGAUCCGAAUUUGU experimental ssc-miR-10a-5p mature miRNA standard MIMAT0013884 ssc-miR-10a-5p
ssc-miR-10b UACCCUGUAGAACCGAAUUUGU experimental ssc-miR-10b mature miRNA standard MIMAT0013885 ssc-miR-10b
ssc-miR-15a UAGCAGCACAUAAUGGUUUGU experimental ssc-miR-15a mature miRNA standard MIMAT0007753 ssc-miR-15a
ssc-miR-15b UAGCAGCACAUCAUGGUUUACA experimental ssc-miR-15b mature miRNA standard MIMAT0002125 ssc-miR-15b
ssc-miR-16 UAGCAGCACGUAAAUAUUGGCG experimental ssc-miR-16 mature miRNA standard MIMAT0007754 ssc-miR-16
ssc-miR-17-3p ACUGCAGUGAAGGCACUUGUAG experimental ssc-miR-17-3p mature miRNA standard MIMAT0015268 ssc-miR-17-3p
ssc-miR-17-5p CAAAGUGCUUACAGUGCAGGUAG experimental ssc-miR-17-5p mature miRNA standard MIMAT0007755 ssc-miR-17-5p

Total number of rows: 454

Table truncated, full table size 46 Kbytes.




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