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Platform GPL26403 Query DataSets for GPL26403
Status Public on May 14, 2019
Title Operon Arabidopsis Version 3.0 microarray
Technology type spotted oligonucleotide
Distribution custom-commercial
Organism Arabidopsis thaliana
Manufacturer The David Galbraith lab, University of Arizona
Manufacture protocol 26,173 probes spotted with synthetic 70-mer oligonucleotides on aminosilane-coated slides
 
 
Submission date Apr 08, 2019
Last update date Apr 08, 2019
Contact name JiHye Hwang
E-mail(s) hwangjh0012@naver.com
Organization name Ewha Womans University
Street address 52, Ewhayeodae-gil
City Seoul
ZIP/Postal code 03760
Country South Korea
 
Samples (23) GSM3713342, GSM3713343, GSM3713344, GSM3713345, GSM3713346, GSM3713347 
Series (1)
GSE129468 Low-oxygen stress responses of Brassicaceae Species

Data table header descriptions
ID
ORF
description
SPOT_ID

Data table
ID ORF description SPOT_ID
3xSSC Control
Alien1 Control: Stratagene Spotreport Alien Oligo
Alien10 Control: Stratagene Spotreport Alien Oligo
Alien2 Control: Stratagene Spotreport Alien Oligo
Alien3 Control: Stratagene Spotreport Alien Oligo
Alien4 Control: Stratagene Spotreport Alien Oligo
Alien5 Control: Stratagene Spotreport Alien Oligo
Alien6 Control: Stratagene Spotreport Alien Oligo
Alien7 Control: Stratagene Spotreport Alien Oligo
Alien8 Control: Stratagene Spotreport Alien Oligo
Alien9 Control: Stratagene Spotreport Alien Oligo
At1g01010 At1g01010 no apical meristem (NAM) family protein contains Pfam PF02365: No apical meristem (NAM) domain; similar to NAC domain protein NAM GB: AAD17313 GI:4325282 from [Arabidopsis thaliana]
At1g01020 At1g01020 transmembrane ARV1-like family protein contains similarity to ARV1 [Homo sapiens] gi|12044055|gb|AAG47671
At1g01030 At1g01030 "DNA-binding protein, putative similar to DNA-binding proteins from [Arabidopsis thaliana] RAV1 GI:3868857, RAV2 GI:3868859; contains Pfam profile PF02362: B3 DNA binding domain"
At1g01040 At1g01040 DEAD/DEAH box helicase carpel factory / CAF identical to RNA helicase/RNAseIII CAF protein GB:AAF03534 GI:6102610 from [Arabidopsis thaliana]
At1g01050 At1g01050 "inorganic pyrophosphatase, putative [soluble] / pyrophosphate phospho-hydrolase, putative / PPase, putative strong similarity to SP|Q43187 Soluble inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase) {Solanum tuberosum}; contains Pfam profile PF00719: inorganic pyrophosphatase"
At1g01060 At1g01060 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain; identical to cDNA LATE ELONGATED HYPOCOTYL MYB transcription factor GI:3281845
At1g01070 At1g01070 nodulin MtN21 family protein similar to MtN21 GI:2598575 (root nodule development) from [Medicago truncatula]
At1g01080 At1g01080 "33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative similar to 33 KDA RIBONUCLEOPROTEIN GB:P19684 from [Nicotiana sylvestris]"
At1g01090 At1g01090 "pyruvate dehydrogenase E1 component alpha subunit, chloroplast identical to pyruvate dehydrogenase E1 alpha subunit GB:AAB86803 GI:2454182 from [Arabidopsis thaliana]; identical to cDNA pyruvate dehydrogenase E1 alpha subunit mRNA, nuclear gene encoding plastid protein GI:2454181"

Total number of rows: 26284

Table truncated, full table size 3637 Kbytes.




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