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GEO help: Mouse over screen elements for information. |
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Status |
Public on Aug 11, 2016 |
Title |
021764 Agilent Human Genotypic Designed CGH 105k Microarray [Probe name version] |
Technology type |
in situ oligonucleotide |
Distribution |
custom-commercial |
Organism |
Homo sapiens |
Manufacturer |
Agilent Technologies |
Manufacture protocol |
Refer to www.chem.agilent.com
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Web link |
http://www.genotypic.co.in/micro_arrays.html?mnu=2
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Submission date |
Aug 11, 2016 |
Last update date |
Aug 11, 2016 |
Contact name |
GEO admin |
E-mail(s) |
geo@ncbi.nlm.nih.gov
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Organization name |
NCBI/NLM/NIH
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Street address |
9000 Rockville Pike
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City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20892 |
Country |
USA |
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Samples (62)
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GSM2274540, GSM2274541, GSM2274542, GSM2274543, GSM2274544, GSM2274545
GSM2274546, GSM2274547, GSM2274548, GSM2274549, GSM2274550, GSM2274551, GSM2274552, GSM2274553, GSM2274554, GSM2274555, GSM2274556, GSM2274557, GSM2274558, GSM2274559, GSM2274560, GSM2274561, GSM2274562, GSM2274563, GSM2274564, GSM2274565, GSM2274566, GSM2274567, GSM2274568, GSM2274569, GSM2274570, GSM2274571, GSM2274572, GSM2274573, GSM2274574, GSM2274575, GSM2274576, GSM2274577, GSM2274578, GSM2274579, GSM2274580, GSM2274581, GSM2274582, GSM2274583, GSM2274584, GSM2274585, GSM2274586, GSM2274587, GSM2274588, GSM2274589, GSM2274590, GSM2274591, GSM2274592, GSM2274593, GSM2274594, GSM2274595, GSM2274596, GSM2274597, GSM2274598, GSM2274599, GSM2274600, GSM2274601
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Series (1) |
GSE85514 |
Array CGH analysis of Oral Leukoplakia and Early Stage Oral Squamous Cell Carcinoma |
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Relations |
Alternative to |
GPL10722 (Feature Number Version) |
Data table header descriptions |
ID |
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CONTROL_TYPE |
Hybridization Control |
GB_ACC |
GenBank Accession number |
GENE_SYMBOL |
Gene Symbol |
GENE_NAME |
Gene Name |
ACCESSION_STRING |
Genbank Accession String |
CHROMOSOMAL_LOCATION |
Chromosomal Location |
CYTOBAND |
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DESCRIPTION |
Protein Description |
SEQUENCE |
Probe Sequence |
SPOT_ID |
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SPOT_ID |
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Data table |
ID |
CONTROL_TYPE |
GB_ACC |
GENE_SYMBOL |
GENE_NAME |
ACCESSION_STRING |
CHROMOSOMAL_LOCATION |
CYTOBAND |
DESCRIPTION |
SEQUENCE |
SPOT_ID |
SPOT_ID |
HsCGHBrightCorner |
pos |
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HsCGHBrightCorner |
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DarkCorner |
pos |
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DarkCorner |
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A_16_P41401808 |
FALSE |
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chr21:19756286-19756345 |
hs|q21.1 |
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AGAGTCAAATTGCACTTGATGAACACATAACCAAATACAGATCTGGACTATATTCCCTCA |
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A_14_P129683 |
FALSE |
NM_001145819 |
SOX6 |
SRY (sex determining region Y)-box 6 |
ref|NM_001145819|ref|NM_017508|ref|NM_001145811|ref|NM_033326 |
chr11:16032139-16032198 |
hs|p15.2 |
Homo sapiens SRY (sex determining region Y)-box 6 (SOX6), transcript variant 4, mRNA. |
TAGAATATGGTCAAGTCAAATTACCCAGAGAGATCTCTAAGAATTTGCATGTGGTCAAGT |
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A_14_P132273 |
FALSE |
NM_006348 |
COG5 |
component of oligomeric golgi complex 5 |
ref|NM_006348|ref|NM_181733|ref|NM_001161520 |
chr7:106789985-106790044 |
hs|q22.3 |
Homo sapiens component of oligomeric golgi complex 5 (COG5), transcript variant 1, mRNA. |
TTACCTGTCCACAAACAGCATAAATATGATCCATAAGTTTCTCCATATTGGTCCAGAATG |
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A_16_P03402155 |
FALSE |
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chr18:70055529-70055588 |
hs|q22.3 |
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CATTGAAACACCCATTAGTATCTTCCACCTTTAAAACAAAAATGAAATGAAGAGCCACCA |
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A_16_P00016431 |
FALSE |
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ens|ENST00000376178 |
chr1:13065132-13065179 |
hs|p36.21 |
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GCCTCTGAATGATCCAAGTTTCCCCAGAGCAGAAGAAGGAGATTGTTA |
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A_14_P136155 |
FALSE |
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chr12:47147923-47147970 |
hs|q13.11 |
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CTATTTTAGATGATATCATGGCAGCAGAGGGGTGCCTCTCCTCTGTAG |
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A_14_P120144 |
FALSE |
NM_001080512 |
BICC1 |
bicaudal C homolog 1 (Drosophila) |
ref|NM_001080512 |
chr10:59944705-59944764 |
hs|q21.1 |
Homo sapiens bicaudal C homolog 1 (Drosophila) (BICC1), mRNA. |
CTTTCAGTTTTCTACATTAGTTTGGAGTGATATGAAAGAATGATCTGTTTCACCTGCGCA |
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A_14_P107591 |
FALSE |
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chr1:90966090-90966149 |
hs|p22.2 |
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GCCTTCATCAGTGTTTGGGATGTAAAGAACCCTGTCTATTTAAAAGAGATACTGCATTTT |
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A_16_P19009295 |
FALSE |
AK309777 |
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gb|AK309777|gb|AK311174 |
chr10:88960512-88960571 |
hs|q23.2 |
Homo sapiens cDNA, FLJ99818. |
AAATAAGTCCAAGTATTATTGTGTTTATGTGTATAAACCTGTGCACACACACAAACGCGT |
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A_14_P131677 |
FALSE |
NM_004621 |
TRPC6 |
transient receptor potential cation channel, subfamily C, member 6 |
ref|NM_004621 |
chr11:100858863-100858922 |
hs|q22.1 |
Homo sapiens transient receptor potential cation channel, subfamily C, member 6 (TRPC6), mRNA. |
AAAACATGACAGAAAATCAGTCTTTACCTATTACCCAGGATATAATGAGCATCTCCATCC |
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A_16_P01572054 |
FALSE |
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chr6:122580710-122580769 |
hs|q22.31 |
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AGTGAACCCATATCTGGAATACACAGTTCATTATCAGTCATTACGTATACCACGAACTTC |
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A_14_P110940 |
FALSE |
AF126782 |
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gb|AF126782 |
chr14:59706215-59706273 |
hs|q23.1 |
Homo sapiens retinal short-chain dehydrogenase/reductase retSDR4 mRNA, complete cds. |
TCCCTGTCTAATGTCTATTCTCTTTGCCTTGCCCTTACTTTTGTTCAGATCAACTTTAG |
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A_14_P113357 |
FALSE |
NM_152763 |
C1orf62 |
chromosome 1 open reading frame 62 |
ref|NM_152763 |
chr1:109201183-109201241 |
hs|p13.3 |
Homo sapiens chromosome 1 open reading frame 62 (C1orf62), mRNA. |
ACTCAGAATCCAACAGAACCTTTCTGTAGAATCCAAATTGATTTTCTGAAGTCAGGTGA |
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A_16_P35346355 |
FALSE |
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chr1:165757185-165757244 |
hs|q24.2 |
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TGGTCCATACTTACATTGTCTTATATTCACTCTTGCCACATTGATCATCGAATCACCATT |
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A_16_P00476466 |
FALSE |
NM_001080427 |
THSD7B |
thrombospondin, type I, domain containing 7B |
ref|NM_001080427 |
chr2:137621657-137621716 |
hs|q22.1 |
Homo sapiens thrombospondin, type I, domain containing 7B (THSD7B), mRNA. |
TGTGGATTTCTCCTTGCTATCATTATTACAGATTTCCGTTCAGATACTTTTAGGTCAGGG |
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A_16_P16114132 |
FALSE |
NM_001099952 |
ITPR1 |
inositol 1,4,5-triphosphate receptor, type 1 |
ref|NM_001099952|ref|NM_002222 |
chr3:4820118-4820177 |
hs|p26.2 |
Homo sapiens inositol 1,4,5-triphosphate receptor, type 1 (ITPR1), transcript variant 1, mRNA. |
GAAGTCATGCAAAGATTTAGTTTTTCAGGGTGAAAATGCATTTACATCGTTGACCTACTG |
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A_16_P00157557 |
FALSE |
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chr1:119346355-119346414 |
hs|p12 |
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ACTGACTCACCACCTAATCTTGCACAAGTCTCTTAATTACAGAAACCACATTCCTATTTT |
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A_16_P17136289 |
FALSE |
NM_001104558 |
ELOVL7 |
ELOVL family member 7, elongation of long chain fatty acids (yeast) |
ref|NM_001104558|ref|NM_024930 |
chr5:60118859-60118918 |
hs|q12.1 |
Homo sapiens ELOVL family member 7, elongation of long chain fatty acids (yeast) (ELOVL7), transcript variant 2, mRNA. |
TATGAGAATCTGACATAAAAAGGAAGGATGAACCTCAATTAGGAAATGTGGTTACTCACC |
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Total number of rows: 101757
Table truncated, full table size 21516 Kbytes.
Supplementary data files not provided |
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