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Status
Public on Jul 22, 2015
Title
Agilent-037880/INRA Sus scrofa 60K v1 (enriched with immune system muscle and adipose tissue genes) [Probe names]
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Sus scrofa Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.genomics.agilent.com/GenericB.aspx?PageType=Custom&SubPageType=Custom&PageID=2011
Description
Arrays of this design have barcodes that begin with 16037880 or 2537880
Contributor(s)
Vincent A , Jegou M , Moreews F , Louveau I , Damon M , Rogel-Gaillard C , Liaubet L , Le Huerou-Luron I Submission date
Mar 16, 2015
Last update date
Jul 22, 2015
Contact name
Alix Pierron
E-mail(s)
alix.p24@hotmail.fr Organization name
INRA
Lab
UMR1331 Toxalim
Street address
180 chemin de Tournefeuille
City
Toulouse
ZIP/Postal code
31300
Country
France
Samples (979)
GSM1634301 , GSM1634302 , GSM1634303 , GSM1634304 , GSM1634305 , GSM1634306
GSM1634307 ,
GSM1634308 ,
GSM1634309 ,
GSM1634310 ,
GSM1634311 ,
GSM1634312 ,
GSM1634313 ,
GSM1634314 ,
GSM1634315 ,
GSM1634316 ,
GSM1634317 ,
GSM1634318 ,
GSM1634319 ,
GSM1634320 ,
GSM1829896 ,
GSM1829897 ,
GSM1829898 ,
GSM1829899 ,
GSM1829900 ,
GSM1829901 ,
GSM1829902 ,
GSM1829903 ,
GSM1829904 ,
GSM1829905 ,
GSM1829906 ,
GSM1829907 ,
GSM1829908 ,
GSM1829909 ,
GSM1829910 ,
GSM1829911 ,
GSM1829912 ,
GSM1829913 ,
GSM1829914 ,
GSM1829915 ,
GSM1829916 ,
GSM1829917 ,
GSM1829918 ,
GSM1829919 ,
GSM1829920 ,
GSM1829921 ,
GSM1829922 ,
GSM1829923 ,
GSM1829924 ,
GSM1829925 ,
GSM1829926 ,
GSM1829927 ,
GSM1829928 ,
GSM1829929 ,
GSM1829930 ,
GSM1829931 ,
GSM1829932 ,
GSM1829933 ,
GSM1829934 ,
GSM1829935 ,
GSM1829936 ,
GSM1829937 ,
GSM1829938 ,
GSM1829939 ,
GSM1829940 ,
GSM1829941 ,
GSM1829942 ,
GSM1829943 ,
GSM1829944 ,
GSM1829945 ,
GSM1829946 ,
GSM1829947 ,
GSM1829948 ,
GSM1829949 ,
GSM1829950 ,
GSM1829951 ,
GSM1829952 ,
GSM1829953 ,
GSM1829954 ,
GSM1829955 ,
GSM1829956 ,
GSM1829957 ,
GSM1829958 ,
GSM1829959 ,
GSM1829960 ,
GSM1829961 ,
GSM1829962 ,
GSM1829963 ,
GSM1829964 ,
GSM1829965 ,
GSM1829966 ,
GSM1829967 ,
GSM1829968 ,
GSM1829969 ,
GSM1829970 ,
GSM1829971 ,
GSM1829972 ,
GSM1829973 ,
GSM1829974 ,
GSM1829975 ,
GSM1829976 ,
GSM1829977 ,
GSM1829978 ,
GSM1829979 ,
GSM1829980 ,
GSM1829981 ,
GSM1829982 ,
GSM1829983 ,
GSM1829984 ,
GSM1829985 ,
GSM1829986 ,
GSM1829987 ,
GSM1829988 ,
GSM1829989 ,
GSM1829990 ,
GSM1829991 ,
GSM1829992 ,
GSM1829993 ,
GSM1829994 ,
GSM1829995 ,
GSM1829996 ,
GSM1829997 ,
GSM1829998 ,
GSM1829999 ,
GSM1830000 ,
GSM1830001 ,
GSM1830002 ,
GSM1830003 ,
GSM1830004 ,
GSM1830005 ,
GSM1830006 ,
GSM1830007 ,
GSM1830008 ,
GSM1830009 ,
GSM1830010 ,
GSM1830011 ,
GSM1830012 ,
GSM1830013 ,
GSM1830014 ,
GSM1830015 ,
GSM2418653 ,
GSM2418654 ,
GSM2418655 ,
GSM2418656 ,
GSM2418657 ,
GSM2418658 ,
GSM2418659 ,
GSM2418660 ,
GSM2418661 ,
GSM2418662 ,
GSM2418663 ,
GSM2418664 ,
GSM2418665 ,
GSM2418666 ,
GSM2418667 ,
GSM2418668 ,
GSM2418669 ,
GSM2418670 ,
GSM2418671 ,
GSM2418672 ,
GSM2418673 ,
GSM2418674 ,
GSM2418675 ,
GSM2418676 ,
GSM2418677 ,
GSM2418678 ,
GSM2418679 ,
GSM2418680 ,
GSM2418681 ,
GSM2418682 ,
GSM2418683 ,
GSM2418684 ,
GSM2418685 ,
GSM2418686 ,
GSM2418687 ,
GSM2418688 ,
GSM2418689 ,
GSM2418690 ,
GSM2418691 ,
GSM2418692 ,
GSM2418693 ,
GSM2418694 ,
GSM2418695 ,
GSM2418696 ,
GSM2418697 ,
GSM2418698 ,
GSM2418699 ,
GSM2418700 ,
GSM2418701 ,
GSM2418702 ,
GSM2418703 ,
GSM2418704 ,
GSM2418705 ,
GSM2418706 ,
GSM2418707 ,
GSM2418708 ,
GSM2418709 ,
GSM2418710 ,
GSM2418711 ,
GSM2418712 ,
GSM2418713 ,
GSM2418714 ,
GSM2418715 ,
GSM2547104 ,
GSM2547105 ,
GSM2547106 ,
GSM2547107 ,
GSM2547108 ,
GSM2547109 ,
GSM2547110 ,
GSM2547111 ,
GSM2547112 ,
GSM2547113 ,
GSM2547114 ,
GSM2547115 ,
GSM2547116 ,
GSM2547117 ,
GSM2547118 ,
GSM2547119 ,
GSM2547120 ,
GSM2547121 ,
GSM2547122 ,
GSM2547123 ,
GSM2547124 ,
GSM2547125 ,
GSM2547126 ,
GSM2547127 ,
GSM2563210 ,
GSM2563211 ,
GSM2563212 ,
GSM2563213 ,
GSM2563214 ,
GSM2563215 ,
GSM2563216 ,
GSM2563217 ,
GSM2563218 ,
GSM2563219 ,
GSM2563220 ,
GSM2563221 ,
GSM2563222 ,
GSM2563223 ,
GSM2563224 ,
GSM2563225 ,
GSM2563226 ,
GSM2563227 ,
GSM2563228 ,
GSM2563229 ,
GSM2563230 ,
GSM2563231 ,
GSM2563232 ,
GSM2563233 ,
GSM2563234 ,
GSM2563235 ,
GSM2563236 ,
GSM2563237 ,
GSM2563238 ,
GSM2563239 ,
GSM2563240 ,
GSM2563241 ,
GSM2563242 ,
GSM2563243 ,
GSM2563244 ,
GSM2563245 ,
GSM2563246 ,
GSM2563247 ,
GSM2563248 ,
GSM2563249 ,
GSM2563250 ,
GSM2563251 ,
GSM2563252 ,
GSM2563253 ,
GSM2563254 ,
GSM2563255 ,
GSM2563256 ,
GSM2563257 ,
GSM2563258 ,
GSM2563259 ,
GSM2563260 ,
GSM2563261 ,
GSM2563262 ,
GSM2563263 ,
GSM2563264 ,
GSM2563265 ,
GSM2563266 ,
GSM2563267 ,
GSM2563268 ,
GSM2563269 ,
GSM2563270 ,
GSM2563271 ,
GSM2563272 ,
GSM2563273 ,
GSM2563274 ,
GSM2563275 ,
GSM2563276 ,
GSM2563277 ,
GSM2563278 ,
GSM2563279 ,
GSM2563280 ,
GSM2563281 ,
GSM2563282 ,
GSM2563283 ,
GSM2563284 ,
GSM2563285 ,
GSM2563286 ,
GSM2563287 ,
GSM2563288 ,
GSM2563289 ,
GSM2563290 ,
GSM2563291 ,
GSM2563292 ,
GSM2563293 ,
GSM2563294 ,
GSM2563295 ,
GSM2563296 ,
GSM2563297 ,
GSM2563298 ,
GSM2563299 ,
GSM2563300 ,
GSM2563301 ,
GSM2563302 ,
GSM2563303 ,
GSM2563304 ,
GSM2563305 ,
GSM2563306 ,
GSM2563307 ,
GSM2563308 ,
GSM2563309 ,
GSM2563310 ,
GSM2563311 ,
GSM2563312 ,
GSM2563313 ,
GSM2563314 ,
GSM2563315 ,
GSM2563316 ,
GSM2563317 ,
GSM2563318 ,
GSM2563319 ,
GSM2563320 ,
GSM2563321 ,
GSM2563322 ,
GSM2563323 ,
GSM2563324 ,
GSM2563325 ,
GSM2563326 ,
GSM2563327 ,
GSM2563328 ,
GSM2563329 ,
GSM2563330 ,
GSM2563331 ,
GSM2563332 ,
GSM2563333 ,
GSM2563334 ,
GSM2563335 ,
GSM2563336 ,
GSM2563337 ,
GSM2563338 ,
GSM2563339 ,
GSM2563340 ,
GSM2563341 ,
GSM2563342 ,
GSM2563343 ,
GSM2563344 ,
GSM2563345 ,
GSM2563346 ,
GSM2563347 ,
GSM2563348 ,
GSM2563349 ,
GSM2563350 ,
GSM2563351 ,
GSM2563352 ,
GSM2563353 ,
GSM2563354 ,
GSM2563355 ,
GSM2563356 ,
GSM2563357 ,
GSM2563358 ,
GSM2563359 ,
GSM2563360 ,
GSM2563361 ,
GSM2563362 ,
GSM2563363 ,
GSM2563364 ,
GSM2563365 ,
GSM2563366 ,
GSM2563367 ,
GSM2563368 ,
GSM2563369 ,
GSM2563370 ,
GSM2563371 ,
GSM2563372 ,
GSM2563373 ,
GSM2563374 ,
GSM2563375 ,
GSM2563376 ,
GSM2563377 ,
GSM2563378 ,
GSM2563379 ,
GSM2563380 ,
GSM2563381 ,
GSM2563382 ,
GSM2563383 ,
GSM2563384 ,
GSM2563385 ,
GSM2563386 ,
GSM2563387 ,
GSM2563388 ,
GSM2563389 ,
GSM2563390 ,
GSM2563391 ,
GSM2563392 ,
GSM2563393 ,
GSM2563394 ,
GSM2563395 ,
GSM2563396 ,
GSM2563397 ,
GSM2563398 ,
GSM2563399 ,
GSM2563400 ,
GSM2563401 ,
GSM2563402 ,
GSM2563403 ,
GSM2563404 ,
GSM2563405 ,
GSM2563406 ,
GSM2563407 ,
GSM2563408 ,
GSM2563409 ,
GSM2563410 ,
GSM2563411 ,
GSM2563412 ,
GSM2563413 ,
GSM2563414 ,
GSM2563415 ,
GSM2563416 ,
GSM2563417 ,
GSM2563418 ,
GSM2563419 ,
GSM2563420 ,
GSM2563421 ,
GSM2563422 ,
GSM2563423 ,
GSM2563424 ,
GSM2563425 ,
GSM2563426 ,
GSM2563427 ,
GSM2563428 ,
GSM2563429 ,
GSM2563430 ,
GSM2563431 ,
GSM2563432 ,
GSM2563433 ,
GSM2563434 ,
GSM2563435 ,
GSM2563436 ,
GSM2563437 ,
GSM2563438 ,
GSM2563439 ,
GSM2563440 ,
GSM2563441 ,
GSM2563442 ,
GSM2563443 ,
GSM2563444 ,
GSM2563445 ,
GSM2563446 ,
GSM2563447 ,
GSM2563448 ,
GSM2563449 ,
GSM2563450 ,
GSM2563451 ,
GSM2563452 ,
GSM2578873 ,
GSM2578874 ,
GSM2578875 ,
GSM2578876 ,
GSM2578877 ,
GSM2578878 ,
GSM2578879 ,
GSM2578880 ,
GSM2578881 ,
GSM2578882 ,
GSM2578883 ,
GSM2578884 ,
GSM2578885 ,
GSM2578886 ,
GSM2578887 ,
GSM2578888 ,
GSM2578889 ,
GSM2578890 ,
GSM2578891 ,
GSM2578892 ,
GSM2578893 ,
GSM2578894 ,
GSM2578895 ,
GSM2578896 ,
GSM2578897 ,
GSM2578898 ,
GSM2578899 ,
GSM2578900 ,
GSM2578901 ,
GSM2578902 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (23)
GSE66918 Comparative effect of DON and plant or microbial biotransformation of DON on gene expression of piglets jejunal explants
GSE71207 Time course of the response to ACTH in pig: biological and transcriptomic study
GSE90980 Comparing the intestinal transcriptome of Meishan and Large White piglets during late fetal development reveals genes involved in glucose and lipid metabolism and immunity as valuable clues of intestinal maturity
GSE96974 Characterization and Correlation of Tissue-Specific Profiles of Transcriptome Activity
GSE97374 Deciphering the genetic regulation of peripheral blood transcriptome in pigs through allele-specific expression analysis and expression genome-wide association study
GSE97817 Transcriptomic profiles of jejunum in piglets exposed to Fumonisin B1
GSE97818 Transcriptomic profiles of liver in piglets exposed to Fumonisin B1
GSE97819 Transcriptomic profiles of jejunal Peyer's patches in piglets exposed to Fumonisin B1
GSE97820 Transcriptomic profiles of spleen in piglets exposed to Fumonisin B1
GSE97821 Transcriptomic fingerprint of the type B trichothecene mycotoxins on the intestine
GSE111953 The transcriptome profile of French SLAdd pigs fed a standard diet suggests the presence of NAFLD
GSE152763 Toxics effects of NX and 3ANX toxins compared to DON in intestinal explants
GSE165968 Transcriptomic analysis of pig intestinal explants exposed or not to deoxynivalenol
GSE189198 Transcriptomic profiles of jejunum, liver, spleen and jejunal Peyer's patches in piglets exposed to Fumonisin B1
GSE240251 Blood transcriptomic data in pigs to improve the understanding of heat stress adaptation mechanisms.
GSE240253 Adrenal transcriptomic data in pigs to improve the understanding of heat stress adaptation mechanisms
GSE240254 Thyroid gland transcriptomic data in pigs to improve the understanding of heat stress adaptation mechanisms
GSE240255 Sub-Cutaneous Adipose Tissue (SCAT) transcriptomic data in pigs to improve the understanding of heat stress adaptation mechanisms
GSE240257 Transcriptomic data in pigs to improve the understanding of heat stress adaptation mechanisms.
GSE240345 Liver transcriptomic data in pigs to improve the understanding of heat stress adaptation mechanisms
GSE240347 Muscle transcriptomic data in pigs to improve the understanding of heat stress adaptation mechanisms
GSE240433 Pituitary transcriptomic data in pigs to improve the understanding of heat stress adaptation mechanisms
GSE271309 Kinetics of the whole blood transcriptome in response to heat stress in pigs from two lines divergently selected for feed efficiency.
Relations Alternative to
GPL16524
Data table header descriptions ID Agilent probe name
CONTROL_TYPE Control type
SEQUENCE Sequence
ANNOTATION DESCRIPTION GENE_NAME Gene Name
SPOT_ID Spot identifier
Data table ID CONTROL_TYPE SEQUENCE ANNOTATION DESCRIPTION GENE_NAME SPOT_ID GE_BrightCorner
pos
null
null
null
CONTROL
DarkCorner
pos
null
null
null
CONTROL
A_72_P609414
FALSE
ATGTTAAACTAGCATACCTGCCTTTATTGTGTTTGTCAGTAGCCGAATTAGAAAGGCCTT
A6M930
eukaryotic translation initiation factor 4A2
EIF4A2
A_72_P025106
FALSE
TTCGATCATCTTCAGACACCTCTTTTCCAAATAAGGTCACATGCACAGGTACATTTATAT
TC557131
No Description
#N/D
gi|54501177|gb|CJ009409.1|CJ009409
FALSE
GACACTGTGGCCTCTCAGTGAACCATCAGGAATAAACAAAGAACTGAATGCCTCAAAAAA
NM_003650
cystatin F (leukocystatin)
CST7
A_72_P223307
FALSE
TTTCTGGGTGTCGCGCTCAGCACTGCTACTGAGATTCAAAACCGAAACAAATTTCTCTAA
P38160
tubulin tyrosine ligase
TTL
O12107
FALSE
GCACACTGCTTTAGAGTGTCATAAATGCCCTCAATGCTATCATCTTTCATACTCAGAAGG
P23921
ribonucleotide reductase M1
RRM1
NA
ignore
null
null
null
ignore
A_72_P415348
FALSE
TCAGTTAAATTAGACTCCCTGTGTCTATTAAAGGATAGCACCAAGGTTAATATAACTGAG
CK462325
933116 MARC 4PIG cDNA 3', mRNA sequence [CK462325]
#N/D
A_72_P120371
FALSE
GTTTCAACCACGATGTATTACTGTGTAAAGACCCTAAAGTGTGAATGTTCTGCAAAAATT
Q52LA3
lin-52 homolog (C. elegans)
LIN52
A_72_P292654
FALSE
ATTCACAATTGAGGATTTCCACAACACGTTCATGGACCTAATCGAGCAGGTGGAGAAGCA
Q96FW1
OTU domain, ubiquitin aldehyde binding 1
OTUB1
A_72_P402498
FALSE
TCCAAAACCCACTGATGAACTTCTTTGGGAGGCGGGACTTGGATCCACAATAGTTTCTTT
TC604496
No Description
#N/D
A_72_P371993
FALSE
TAGGAAATTCTCAAAGTCATTCTTAACTTCGTAAGTTTTCTTGGTAACCTTTGCTTGGAG
NM_152647
chromosome 15 open reading frame 33
C15orf33
A_72_P183841
FALSE
CTCTGCTGGAAAGCAAGATCATACTACCCACTTGTCTTAAATACTTTTTTCCGTCAAAAA
TC579771
No Description
#N/D
O9872
FALSE
CAGGCAGCAGGCAGGGACTGTGGGTTGGTGTGTGCATTAAAGTGCTCTGGGGAAGAAAAA
NM_032355
MON1 homolog A (yeast)
MON1A
A_72_P288824
FALSE
TGTTCCTTTTCCTGGAATGCTTTAGACTCCAAAGTTCTGACTCGTTCGATTTCCTCAGTC
NM_020242
kinesin family member 15
KIF15
A_72_P502529
FALSE
GAGCTGTGAGATTGTGGGTGACTTCTTTGTTTTAGTTCTACTCATCTGTCTATTTTTTCC
XM_001924869
similar to Transcription elongation factor A protein-like 4 (TCEA-like protein 4) (Transcription elongation factor S-II protein-like 4)
TCEAL4
A_72_P106136
FALSE
ATTGTACCACTGGAGAAGGTGACTATCAGTTAGTACAGCATGAAGTCTTGTGCTCCATGA
Q9H422
homeodomain interacting protein kinase 3
HIPK3
A_72_P199657
FALSE
TTCCCTTTCAGTAATGAATGATGTGACCAACCAAGGAGAATTTTTTGTTCTGTTACTAAG
CK449926
893531 MARC 4PIG cDNA 5', mRNA sequence [CK449926]
#N/D
A_72_P288919
FALSE
GGAAACCATTATCCATATGATGCCACCATCATCCTAATTCCAAAACCAGACAAAGATACC
#N/D
No Description
#N/D
60362 8169 Kbytes .Supplementary data files not provided
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