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Platform GPL19014 Query DataSets for GPL19014
Status Public on Jul 30, 2014
Title [ChiGene-1_0-st] Affymetrix Chicken Gene 1.0 ST Array [transcript (gene) version]
Technology type in situ oligonucleotide
Distribution commercial
Organism Gallus gallus
Manufacturer Affymetrix
Manufacture protocol See manufacturer's web site
 
Description Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

#%chip_type=ChiGene-1_0-st-v1
#%lib_set_name=ChiGene-1_0-st
#%lib_set_version=v1
#%genome-species=Gallus gallus
#%genome-version=galgal3
#%genome-version-ucsc=galgal3
#%genome-version-create_date=2006-05-00
#%genome-lifted-method=NONE
#%genome-lifted_from-species=Gallus gallus
#%genome-lifted_from-version-ucsc=galgal3
#%netaffx-annotation-date=2013-08-30
 
Submission date Jul 30, 2014
Last update date Jul 30, 2014
Organization Affymetrix, Inc.
E-mail(s) geo@ncbi.nlm.nih.gov, support@affymetrix.com
Phone 888-362-2447
URL http://www.affymetrix.com/index.affx
Street address
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (463) GSM1456444, GSM1456445, GSM1456446, GSM1456447, GSM1456448, GSM1456449 
Series (17)
GSE59919 Macrophages from sex-reversed chicken embryos [set1]
GSE59921 Macrophages from male and female chickens
GSE63389 Gene expression profile at liver tissue of White Leghorn and four Korean native chickens

Data table header descriptions
ID
probeset_id
seqname
strand
start
stop
total_probes
gene_assignment
mrna_assignment
swissprot
unigene
GO_biological_process
GO_cellular_component
GO_molecular_function
pathway
protein_domains
crosshyb_type
category
GB_ACC Representative GenBank Accession number
SPOT_ID

Data table
ID probeset_id seqname strand start stop total_probes gene_assignment mrna_assignment swissprot unigene GO_biological_process GO_cellular_component GO_molecular_function pathway protein_domains crosshyb_type category GB_ACC SPOT_ID
15384042 15384042 chr1 + 33923 66461 10 XM_424476 // GOLGB1 // golgin B1 // --- // 426868 /// ENSGALT00000015914 // GOLGB1 // golgin B1 // --- // --- XM_424476 // RefSeq // PREDICTED: Gallus gallus golgin B1 (GOLGB1), mRNA. // chr1 // 100 // 100 // 3 // 3 // 0 /// ENSGALT00000015914 // ENSEMBL // cdna:known_by_projection chromosome:Galgal4:1:41112:75573:1 gene:ENSGALG00000009783 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 3 // 3 // 0 ENSGALT00000015914 // E1C6Z5 XM_424476 // Gga.55420 // connective tissue| epiphyseal growth plate| adult /// ENSGALT00000015914 // Gga.55096 // ovary|embryo| adult --- ENSGALT00000015914 // GO:0005737 // cytoplasm // inferred from electronic annotation /// ENSGALT00000015914 // GO:0005794 // Golgi apparatus // inferred from electronic annotation ENSGALT00000015914 // GO:0004812 // aminoacyl-tRNA ligase activity // inferred from electronic annotation /// ENSGALT00000015914 // GO:0005524 // ATP binding // inferred from electronic annotation --- --- 1 main XM_424476 XM_424476
15384066 15384066 chr1 + 69104 83498 10 NM_001031401 // HCLS1 // hematopoietic cell-specific Lyn substrate 1 // --- // 426867 /// ENSGALT00000015903 // HCLS1 // hematopoietic cell-specific Lyn substrate 1 // --- // 426867 NM_001031401 // RefSeq // Gallus gallus hematopoietic cell-specific Lyn substrate 1 (HCLS1), mRNA. // chr1 // 200 // 200 // 2 // 1 // 0 /// ENSGALT00000015903 // ENSEMBL // cdna:known chromosome:Galgal4:1:77010:89016:1 gene:ENSGALG00000009778 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 200 // 200 // 2 // 1 // 0 NM_001031401 // Q5ZMV0 /// ENSGALT00000015903 // Q5ZMV0 NM_001031401 // Gga.9017 // blood| bursa of Fabricius| small intestine| spleen| thymus| juvenile| adult /// ENSGALT00000015903 // Gga.9017 // blood| bursa of Fabricius| small intestine| spleen| thymus| juvenile| adult NM_001031401 // GO:0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// NM_001031401 // GO:0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// NM_001031401 // GO:0009725 // response to hormone stimulus // inferred from electronic annotation /// NM_001031401 // GO:0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// NM_001031401 // GO:0030218 // erythrocyte differentiation // inferred from electronic annotation /// NM_001031401 // GO:0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// NM_001031401 // GO:0030854 // positive regulation of granulocyte differentiation // inferred from electronic annotation /// NM_001031401 // GO:0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// NM_001031401 // GO:0042531 // positive regulation of tyrosine phosphorylation of STAT protein // inferred from electronic annotation /// NM_001031401 // GO:0042993 // positive regulation of transcription factor import into nucleus // inferred from electronic annotation /// NM_001031401 // GO:0045651 // positive regulation of macrophage differentiation // inferred from electronic annotation /// NM_001031401 // GO:0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// NM_001031401 // GO:0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// NM_001031401 // GO:0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// NM_001031401 // GO:0071345 // cellular response to cytokine stimulus // inferred from electronic annotation /// NM_001031401 // GO:2000107 // negative regulation of leukocyte apoptotic process // inferred from electronic annotation /// ENSGALT00000015903 // GO:0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// ENSGALT00000015903 // GO:0009725 // response to hormone stimulus // inferred from electronic annotation /// ENSGALT00000015903 // GO:0014068 // positive regulation of phosphatidylinositol 3-kinase cascade // inferred from electronic annotation /// ENSGALT00000015903 // GO:0030218 // erythrocyte differentiation // inferred from electronic annotation /// ENSGALT00000015903 // GO:0030833 // regulation of actin filament polymerization // inferred from electronic annotation /// ENSGALT00000015903 // GO:0030854 // positive regulation of granulocyte differentiation // inferred from electronic annotation /// ENSGALT00000015903 // GO:0033138 // positive regulation of peptidyl-serine phosphorylation // inferred from electronic annotation /// ENSGALT00000015903 // GO:0042531 // positive regulation of tyrosine phosphorylation of STAT protein // inferred from electronic annotation /// ENSGALT00000015903 // GO:0042993 // positive regulation of transcription factor import into nucleus // inferred from electronic annotation /// ENSGALT00000015903 // GO:0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// ENSGALT00000015903 // GO:0050731 // positive regulation of peptidyl-tyrosine phosphorylation // inferred from electronic annotation /// ENSGALT00000015903 // GO:0051897 // positive regulation of protein kinase B signaling cascade // inferred from electronic annotation /// ENSGALT00000015903 // GO:0071345 // cellular response to cytokine stimulus // inferred from electronic annotation /// ENSGALT00000015903 // GO:2000107 // negative regulation of leukocyte apoptotic process // inferred from electronic annotation /// ENSGALT00000015903 // GO:0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// ENSGALT00000015903 // GO:0045651 // positive regulation of macrophage differentiation // inferred from electronic annotation NM_001031401 // GO:0005634 // nucleus // inferred from electronic annotation /// NM_001031401 // GO:0005667 // transcription factor complex // inferred from electronic annotation /// NM_001031401 // GO:0005737 // cytoplasm // inferred from electronic annotation /// NM_001031401 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSGALT00000015903 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSGALT00000015903 // GO:0005634 // nucleus // inferred from electronic annotation /// ENSGALT00000015903 // GO:0005737 // cytoplasm // inferred from electronic annotation /// ENSGALT00000015903 // GO:0005667 // transcription factor complex // inferred from electronic annotation NM_001031401 // GO:0001085 // RNA polymerase II transcription factor binding // inferred from electronic annotation /// NM_001031401 // GO:0017124 // SH3 domain binding // inferred from electronic annotation /// NM_001031401 // GO:0019901 // protein kinase binding // inferred from electronic annotation /// NM_001031401 // GO:0032403 // protein complex binding // inferred from electronic annotation /// ENSGALT00000015903 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSGALT00000015903 // GO:0001085 // RNA polymerase II transcription factor binding // inferred from electronic annotation /// ENSGALT00000015903 // GO:0017124 // SH3 domain binding // inferred from electronic annotation /// ENSGALT00000015903 // GO:0019901 // protein kinase binding // inferred from electronic annotation /// ENSGALT00000015903 // GO:0032403 // protein complex binding // inferred from electronic annotation --- ENSGALT00000015903 // Pfam // IPR001452 // Src homology-3 domain /// ENSGALT00000015903 // Pfam // IPR003134 // Hs1/Cortactin /// ENSGALT00000015903 // Pfam // IPR011511 // Variant SH3 1 main NM_001031401 NM_001031401
15384082 15384082 chr1 + 99079 102964 9 ENSGALT00000015890 // RABL2B // RAB, member of RAS oncogene family-like 2B // --- // 426865 ENSGALT00000015890 // ENSEMBL // cdna:novel chromosome:Galgal4:1:106372:111774:1 gene:ENSGALG00000009770 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 89 // 89 // 8 // 9 // 0 ENSGALT00000015890 // E1C722 ENSGALT00000015890 // Gga.11752 // brain| head| limb| liver| ovary|embryo| adult ENSGALT00000015890 // GO:0007165 // signal transduction // inferred from electronic annotation /// ENSGALT00000015890 // GO:0006184 // GTP catabolic process // inferred from electronic annotation /// ENSGALT00000015890 // GO:0006886 // intracellular protein transport // inferred from electronic annotation /// ENSGALT00000015890 // GO:0006913 // nucleocytoplasmic transport // inferred from electronic annotation /// ENSGALT00000015890 // GO:0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// ENSGALT00000015890 // GO:0015031 // protein transport // inferred from electronic annotation ENSGALT00000015890 // GO:0005622 // intracellular // inferred from electronic annotation /// ENSGALT00000015890 // GO:0016020 // membrane // inferred from electronic annotation /// ENSGALT00000015890 // GO:0005634 // nucleus // inferred from electronic annotation /// ENSGALT00000015890 // GO:0005737 // cytoplasm // inferred from electronic annotation ENSGALT00000015890 // GO:0003924 // GTPase activity // inferred from electronic annotation /// ENSGALT00000015890 // GO:0005525 // GTP binding // inferred from electronic annotation /// ENSGALT00000015890 // GO:0000166 // nucleotide binding // inferred from electronic annotation --- ENSGALT00000015890 // Pfam // IPR000795 // Elongation factor, GTP-binding domain /// ENSGALT00000015890 // Pfam // IPR001806 // Small GTPase superfamily /// ENSGALT00000015890 // Pfam // IPR006689 // Small GTPase superfamily, ARF/SAR type /// ENSGALT00000015890 // Pfam // IPR006762 // Gtr1/RagA G protein /// ENSGALT00000015890 // Pfam // IPR013684 // Mitochondrial Rho-like 1 main ENSGALT00000015890
15384103 15384103 chr1 + 312691 312787 3 NR_035090 // MIR1604 // microRNA mir-1604 // --- // 100315910 /// ENSGALT00000042400 // MIR1604 // microRNA mir-1604 // --- // 100315910 NR_035090 // RefSeq // Gallus gallus microRNA mir-1604 (MIR1604), microRNA. // chr1 // 100 // 100 // 3 // 3 // 0 /// GENSCAN00000010835 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:300510:315095:1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 3 // 3 // 0 /// ENSGALT00000042400 // ENSEMBL // ncrna:miRNA chromosome:Galgal4:1:314579:314675:1 gene:ENSGALG00000025487 gene_biotype:miRNA transcript_biotype:miRNA // chr1 // 100 // 100 // 3 // 3 // 0 /// gga-mir-1604 // miRBase Micro RNA Database // MI0007331 Gallus gallus miR-1604 stem-loop // chr1 // 100 // 100 // 3 // 3 // 0 --- --- --- --- --- --- --- 3 main NR_035090 NR_035090
15384105 15384105 chr1 + 411338 412252 8 NM_001031572 // LMF2 // lipase maturation factor 2 // --- // 429380 /// ENSGALT00000040414 // LMF2 // lipase maturation factor 2 // --- // 429380 NM_001031572 // RefSeq // Gallus gallus lipase maturation factor 2 (LMF2), mRNA. // chr1 // 88 // 88 // 7 // 8 // 0 /// GENSCAN00000010833 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:602199:606449:-1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 8 // 8 // 0 /// ENSGALT00000040414 // ENSEMBL // cdna:known chromosome:Galgal4:1:601646:606054:-1 gene:ENSGALG00000023981 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 8 // 8 // 0 NM_001031572 // Q5ZKZ9 /// ENSGALT00000040414 // F1P0J3 /// ENSGALT00000040414 // Q5ZKZ9 NM_001031572 // Gga.22535 // bursa of Fabricius| gonad| muscle|embryo| juvenile /// ENSGALT00000040414 // Gga.22535 // bursa of Fabricius| gonad| muscle|embryo| juvenile /// ENSGALT00000040414 // Gga.37462 // bursa of Fabricius| ovary|embryo| juvenile| adult --- NM_001031572 // GO:0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// NM_001031572 // GO:0016021 // integral to membrane // inferred from electronic annotation /// NM_001031572 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// NM_001031572 // GO:0016020 // membrane // inferred from electronic annotation /// ENSGALT00000040414 // GO:0005789 // endoplasmic reticulum membrane // inferred from electronic annotation /// ENSGALT00000040414 // GO:0016021 // integral to membrane // inferred from electronic annotation /// ENSGALT00000040414 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation /// ENSGALT00000040414 // GO:0016020 // membrane // inferred from electronic annotation --- --- ENSGALT00000040414 // Pfam // IPR009613 // Lipase maturation factor 1 main NM_001031572 NM_001031572
15384110 15384110 chr1 + 412482 419279 6 XM_003640320 // LOC100858144 // uncharacterized LOC100858144 // --- // 100858144 XM_003640320 // RefSeq // PREDICTED: Gallus gallus uncharacterized LOC100858144 (LOC100858144), mRNA. // chr1 // 100 // 100 // 6 // 6 // 0 --- --- --- --- --- --- --- 1 main XM_003640320 XM_003640320
15384147 15384147 chr1 + 475203 479606 10 ENSGALT00000021993 // GCC1 // GRIP and coiled-coil domain containing 1 // --- // 430581 ENSGALT00000021993 // ENSEMBL // cdna:known chromosome:Galgal4:1:429084:433969:1 gene:ENSGALG00000013502 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 10 // 10 // 0 ENSGALT00000021993 // F1NG04 /// ENSGALT00000021993 // Q5F4A5 ENSGALT00000021993 // Gga.22722 // bursa of Fabricius| muscle|embryo| juvenile| adult /// ENSGALT00000021993 // Gga.51429 // bursa of Fabricius| juvenile ENSGALT00000021993 // GO:0000042 // protein targeting to Golgi // inferred from electronic annotation ENSGALT00000021993 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSGALT00000021993 // GO:0005737 // cytoplasm // inferred from electronic annotation /// ENSGALT00000021993 // GO:0005794 // Golgi apparatus // inferred from electronic annotation ENSGALT00000021993 // GO:0005515 // protein binding // inferred from electronic annotation --- ENSGALT00000021993 // Pfam // IPR000237 // GRIP 1 main ENSGALT00000021993
15384176 15384176 chr1 + 585620 591596 7 AF019977 // SMO // smoothened, frizzled family receptor // --- // 395949 /// ENSGALT00000040362 // SMO // smoothened, frizzled family receptor // --- // 395949 AF019977 // GenBank // Gallus gallus smoothened mRNA, partial cds. // chr1 // 86 // 86 // 6 // 7 // 0 /// GENSCAN00000010890 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:651527:663802:1 transcript_biotype:protein_coding // chr1 // 86 // 86 // 6 // 7 // 0 /// ENSGALT00000040362 // ENSEMBL // cdna:known chromosome:Galgal4:1:658443:664773:1 gene:ENSGALG00000007910 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 7 // 7 // 0 AF019977 // O42224 /// ENSGALT00000040362 // F1P2K3 /// ENSGALT00000040362 // O42224 AF019977 // Gga.4082 // bursa of Fabricius| muscle|embryo| juvenile /// ENSGALT00000040362 // Gga.4082 // bursa of Fabricius| muscle|embryo| juvenile /// ENSGALT00000040362 // Gga.53510 // epiphyseal growth plate| head| liver| ovary| testis|embryo| hatchling| adult AF019977 // GO:0007224 // smoothened signaling pathway // inferred from electronic annotation /// AF019977 // GO:0007275 // multicellular organismal development // inferred from electronic annotation /// AF019977 // GO:0007165 // signal transduction // inferred from electronic annotation /// AF019977 // GO:0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// AF019977 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007224 // smoothened signaling pathway // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007275 // multicellular organismal development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0000122 // negative regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// ENSGALT00000040362 // GO:0001503 // ossification // inferred from electronic annotation /// ENSGALT00000040362 // GO:0001570 // vasculogenesis // inferred from electronic annotation /// ENSGALT00000040362 // GO:0001649 // osteoblast differentiation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0001701 // in utero embryonic development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0001708 // cell fate specification // inferred from electronic annotation /// ENSGALT00000040362 // GO:0001755 // neural crest cell migration // inferred from electronic annotation /// ENSGALT00000040362 // GO:0001947 // heart looping // inferred from electronic annotation /// ENSGALT00000040362 // GO:0002052 // positive regulation of neuroblast proliferation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0002053 // positive regulation of mesenchymal cell proliferation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0003007 // heart morphogenesis // inferred from electronic annotation /// ENSGALT00000040362 // GO:0003140 // determination of left/right asymmetry in lateral mesoderm // inferred from electronic annotation /// ENSGALT00000040362 // GO:0003323 // type B pancreatic cell development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007165 // signal transduction // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007166 // cell surface receptor signaling pathway // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007186 // G-protein coupled receptor signaling pathway // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007228 // positive regulation of hh target transcription factor activity // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007368 // determination of left/right symmetry // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007371 // ventral midline determination // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007389 // pattern specification process // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007417 // central nervous system development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0007494 // midgut development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0043066 // negative regulation of apoptotic process // inferred from electronic annotation /// ENSGALT00000040362 // GO:0008284 // positive regulation of cell proliferation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0009953 // dorsal/ventral pattern formation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0010468 // regulation of gene expression // inferred from electronic annotation /// ENSGALT00000040362 // GO:0010628 // positive regulation of gene expression // inferred from electronic annotation /// ENSGALT00000040362 // GO:0010629 // negative regulation of gene expression // inferred from electronic annotation /// ENSGALT00000040362 // GO:0050821 // protein stabilization // inferred from electronic annotation /// ENSGALT00000040362 // GO:0021696 // cerebellar cortex morphogenesis // inferred from electronic annotation /// ENSGALT00000040362 // GO:0021904 // dorsal/ventral neural tube patterning // inferred from electronic annotation /// ENSGALT00000040362 // GO:0021910 // smoothened signaling pathway involved in ventral spinal cord patterning // inferred from electronic annotation /// ENSGALT00000040362 // GO:0021938 // smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0021953 // central nervous system neuron differentiation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0030857 // negative regulation of epithelial cell differentiation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0031069 // hair follicle morphogenesis // inferred from electronic annotation /// ENSGALT00000040362 // GO:0034504 // protein localization to nucleus // inferred from electronic annotation /// ENSGALT00000040362 // GO:0035264 // multicellular organism growth // inferred from electronic annotation /// ENSGALT00000040362 // GO:0042307 // positive regulation of protein import into nucleus // inferred from electronic annotation /// ENSGALT00000040362 // GO:0042475 // odontogenesis of dentin-containing tooth // inferred from electronic annotation /// ENSGALT00000040362 // GO:0043392 // negative regulation of DNA binding // inferred from electronic annotation /// ENSGALT00000040362 // GO:0045880 // positive regulation of smoothened signaling pathway // inferred from electronic annotation /// ENSGALT00000040362 // GO:0045944 // positive regulation of transcription from RNA polymerase II promoter // inferred from electronic annotation /// ENSGALT00000040362 // GO:0048468 // cell development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0048565 // digestive tract development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0048589 // developmental growth // inferred from electronic annotation /// ENSGALT00000040362 // GO:0048853 // forebrain morphogenesis // inferred from electronic annotation /// ENSGALT00000040362 // GO:0050679 // positive regulation of epithelial cell proliferation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0051799 // negative regulation of hair follicle development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0060248 // detection of cell density by contact stimulus involved in contact inhibition // inferred from electronic annotation /// ENSGALT00000040362 // GO:0060644 // mammary gland epithelial cell differentiation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0060684 // epithelial-mesenchymal cell signaling // inferred from electronic annotation /// ENSGALT00000040362 // GO:0061053 // somite development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0061113 // pancreas morphogenesis // inferred from electronic annotation /// ENSGALT00000040362 // GO:0071397 // cellular response to cholesterol // inferred from electronic annotation /// ENSGALT00000040362 // GO:0072001 // renal system development // inferred from electronic annotation /// ENSGALT00000040362 // GO:0072285 // mesenchymal to epithelial transition involved in metanephric renal vesicle formation // inferred from electronic annotation /// ENSGALT00000040362 // GO:0090190 // positive regulation of branching involved in ureteric bud morphogenesis // inferred from electronic annotation /// ENSGALT00000040362 // GO:2000036 // regulation of stem cell maintenance // inferred from electronic annotation /// ENSGALT00000040362 // GO:2000826 // regulation of heart morphogenesis // inferred from electronic annotation AF019977 // GO:0016021 // integral to membrane // inferred from electronic annotation /// AF019977 // GO:0016020 // membrane // inferred from electronic annotation /// ENSGALT00000040362 // GO:0016021 // integral to membrane // inferred from electronic annotation /// ENSGALT00000040362 // GO:0016020 // membrane // inferred from electronic annotation /// ENSGALT00000040362 // GO:0043231 // intracellular membrane-bounded organelle // inferred from electronic annotation /// ENSGALT00000040362 // GO:0005794 // Golgi apparatus // inferred from electronic annotation /// ENSGALT00000040362 // GO:0005901 // caveola // inferred from electronic annotation /// ENSGALT00000040362 // GO:0005929 // cilium // inferred from electronic annotation /// ENSGALT00000040362 // GO:0072372 // primary cilium // inferred from electronic annotation AF019977 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// AF019977 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// AF019977 // GO:0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// ENSGALT00000040362 // GO:0004930 // G-protein coupled receptor activity // inferred from electronic annotation /// ENSGALT00000040362 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSGALT00000040362 // GO:0004871 // signal transducer activity // inferred from electronic annotation /// ENSGALT00000040362 // GO:0004888 // transmembrane signaling receptor activity // inferred from electronic annotation /// ENSGALT00000040362 // GO:0005113 // patched binding // inferred from electronic annotation /// ENSGALT00000040362 // GO:0005119 // smoothened binding // inferred from electronic annotation /// ENSGALT00000040362 // GO:0008144 // drug binding // inferred from electronic annotation --- ENSGALT00000040362 // Pfam // IPR000539 // Frizzled protein 1 main AF019977 AF019977
15384189 15384189 chr1 + 620422 637230 12 XM_414971 // AHCYL2 // adenosylhomocysteinase-like 2 // --- // 416675 /// ENSGALT00000012929 // AHCYL2 // adenosylhomocysteinase-like 2 // --- // 416675 XM_414971 // RefSeq // PREDICTED: Gallus gallus adenosylhomocysteinase-like 2 (AHCYL2), mRNA. // chr1 // 92 // 92 // 11 // 12 // 0 /// ENSGALT00000012929 // ENSEMBL // cdna:novel chromosome:Galgal4:1:690901:708802:1 gene:ENSGALG00000007960 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 92 // 92 // 11 // 12 // 0 ENSGALT00000012929 // F1NSH8 --- ENSGALT00000012929 // GO:0055114 // oxidation-reduction process // inferred from electronic annotation /// ENSGALT00000012929 // GO:0006730 // one-carbon metabolic process // inferred from electronic annotation --- ENSGALT00000012929 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// ENSGALT00000012929 // GO:0004013 // adenosylhomocysteinase activity // inferred from electronic annotation /// ENSGALT00000012929 // GO:0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor // inferred from electronic annotation /// ENSGALT00000012929 // GO:0016787 // hydrolase activity // inferred from electronic annotation /// ENSGALT00000012929 // GO:0048037 // cofactor binding // inferred from electronic annotation --- ENSGALT00000012929 // Pfam // IPR000043 // Adenosylhomocysteinase /// ENSGALT00000012929 // Pfam // IPR006140 // D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding /// ENSGALT00000012929 // Pfam // IPR015878 // S-adenosyl-L-homocysteine hydrolase, NAD binding domain 1 main XM_414971 XM_414971
15384203 15384203 chr1 + 638902 647614 4 CR338909 // FAM40B // family with sequence similarity 40, member B // --- // 416676 /// ENSGALT00000042666 // FAM40B // family with sequence similarity 40, member B // --- // 416676 CR338909 // GenBank // Gallus gallus finished cDNA, clone ChEST987i8. // chr1 // 75 // 75 // 3 // 4 // 0 /// GENSCAN00000010869 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:687553:724306:1 transcript_biotype:protein_coding // chr1 // 75 // 75 // 3 // 4 // 0 /// ENSGALT00000042666 // ENSEMBL // cdna:known_by_projection chromosome:Galgal4:1:710117:727850:1 gene:ENSGALG00000026181 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 75 // 75 // 3 // 4 // 0 ENSGALT00000042666 // R4GJP3 CR338909 // Gga.13663 // brain| bursa of Fabricius| connective tissue| embryonic tissue| head| heart| muscle| ovary| testis|embryo| juvenile| adult /// ENSGALT00000042666 // Gga.13663 // brain| bursa of Fabricius| connective tissue| embryonic tissue| head| heart| muscle| ovary| testis|embryo| juvenile| adult /// ENSGALT00000042666 // Gga.29053 // bursa of Fabricius| juvenile /// ENSGALT00000042666 // Gga.56179 // bursa of Fabricius| juvenile ENSGALT00000042666 // GO:0007010 // cytoskeleton organization // inferred from electronic annotation /// ENSGALT00000042666 // GO:0008360 // regulation of cell shape // inferred from electronic annotation /// ENSGALT00000042666 // GO:0016477 // cell migration // inferred from electronic annotation ENSGALT00000042666 // GO:0005737 // cytoplasm // inferred from electronic annotation --- --- ENSGALT00000042666 // Pfam // IPR012486 // N1221-like /// ENSGALT00000042666 // Pfam // IPR021819 // Protein of unknown function DUF3402 1 main CR338909 CR338909
15384217 15384217 chr1 + 668691 716284 9 NM_001030646 // NRF1 // nuclear respiratory factor 1 // --- // 416677 /// ENSGALT00000012946 // NRF1 // nuclear respiratory factor 1 // --- // 416677 NM_001030646 // RefSeq // Gallus gallus nuclear respiratory factor 1 (NRF1), mRNA. // chr1 // 89 // 89 // 8 // 9 // 0 /// GENSCAN00000010876 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:731667:790947:1 transcript_biotype:protein_coding // chr1 // 89 // 89 // 8 // 9 // 0 /// ENSGALT00000012946 // ENSEMBL // cdna:known chromosome:Galgal4:1:757267:795092:1 gene:ENSGALG00000007973 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 9 // 9 // 0 NM_001030646 // Q90979 /// ENSGALT00000012946 // Q90979 NM_001030646 // Gga.17442 // blood| head| ovary|embryo| adult /// ENSGALT00000012946 // Gga.17442 // blood| head| ovary|embryo| adult ENSGALT00000012946 // GO:0007005 // mitochondrion organization // inferred from electronic annotation --- --- --- ENSGALT00000012946 // Pfam // IPR019525 // Nuclear respiratory factor 1, NLS/DNA-binding, dimerisation domain /// ENSGALT00000012946 // Pfam // IPR019526 // Nuclear respiratory factor-1, activation binding domain 1 main NM_001030646 NM_001030646
15384233 15384233 chr1 + 777036 789913 10 BX935678 // KLHDC10 // kelch domain containing 10 // --- // 427683 /// XM_425257 // KLHDC10 // kelch domain containing 10 // --- // 427683 /// ENSGALT00000013005 // KLHDC10 // kelch domain containing 10 // --- // 427683 BX935678 // GenBank // Gallus gallus finished cDNA, clone ChEST757l11. // chr1 // 90 // 90 // 9 // 10 // 0 /// XM_425257 // RefSeq // PREDICTED: Gallus gallus kelch domain containing 10 (KLHDC10), mRNA. // chr1 // 100 // 100 // 10 // 10 // 0 /// GENSCAN00000010849 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:859845:872633:1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 10 // 10 // 0 /// ENSGALT00000013005 // ENSEMBL // cdna:novel chromosome:Galgal4:1:859766:872702:1 gene:ENSGALG00000008013 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 10 // 10 // 0 BX935678 // Q5ZHK5 /// XM_425257 // Q5ZHK5 /// ENSGALT00000013005 // F1NR25 /// ENSGALT00000013005 // Q5ZHK5 BX935678 // Gga.10068 // brain| bursa of Fabricius| head| ovary|embryo| juvenile| adult /// XM_425257 // Gga.10068 // brain| bursa of Fabricius| head| ovary|embryo| juvenile| adult /// ENSGALT00000013005 // Gga.10068 // brain| bursa of Fabricius| head| ovary|embryo| juvenile| adult --- --- ENSGALT00000013005 // GO:0005515 // protein binding // inferred from electronic annotation --- ENSGALT00000013005 // Pfam // IPR006652 // Kelch repeat type 1 /// ENSGALT00000013005 // Pfam // IPR011498 // Kelch repeat type 2 1 main BX935678 BX935678
15384244 15384244 chr1 + 817068 820666 10 ENSGALT00000040314 // C7ORF45 // --- // --- // --- ENSGALT00000040314 // ENSEMBL // cdna:novel chromosome:Galgal4:1:896406:902381:1 gene:ENSGALG00000023942 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 10 // 10 // 0 ENSGALT00000040314 // E1C3H5 --- --- --- --- --- --- 1 main ENSGALT00000040314
15384249 15384249 chr1 + 818869 827666 12 NM_001257214 // CPA2 // carboxypeptidase A2 (pancreatic) // --- // 416682 /// ENSGALT00000013059 // CPA2 // --- // --- // --- NM_001257214 // RefSeq // Gallus gallus carboxypeptidase A2 (pancreatic) (CPA2), mRNA. // chr1 // 100 // 100 // 12 // 12 // 0 /// ENSGALT00000013059 // ENSEMBL // cdna:known chromosome:Galgal4:1:902989:909381:1 gene:ENSGALG00000008048 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 12 // 12 // 0 ENSGALT00000013059 // E1C2B2 NM_001257214 // Gga.55647 // pancreas| adult /// ENSGALT00000013059 // Gga.55647 // pancreas| adult ENSGALT00000013059 // GO:0006508 // proteolysis // inferred from electronic annotation --- ENSGALT00000013059 // GO:0004180 // carboxypeptidase activity // inferred from electronic annotation /// ENSGALT00000013059 // GO:0004181 // metallocarboxypeptidase activity // inferred from electronic annotation /// ENSGALT00000013059 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSGALT00000013059 // GO:0008233 // peptidase activity // inferred from electronic annotation /// ENSGALT00000013059 // GO:0008237 // metallopeptidase activity // inferred from electronic annotation /// ENSGALT00000013059 // GO:0016787 // hydrolase activity // inferred from electronic annotation /// ENSGALT00000013059 // GO:0046872 // metal ion binding // inferred from electronic annotation --- ENSGALT00000013059 // Pfam // IPR000834 // Peptidase M14, carboxypeptidase A /// ENSGALT00000013059 // Pfam // IPR003146 // Proteinase inhibitor, carboxypeptidase propeptide 1 main NM_001257214 NM_001257214
15384280 15384280 chr1 + 850679 853738 14 XM_425258 // MEST // mesoderm specific transcript homolog (mouse) // --- // 427684 /// ENSGALT00000013166 // MEST // mesoderm specific transcript homolog (mouse) // --- // 427684 XM_425258 // RefSeq // PREDICTED: Gallus gallus mesoderm specific transcript homolog (mouse) (MEST), mRNA. // chr1 // 100 // 100 // 14 // 14 // 0 /// GENSCAN00000010841 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:930981:934477:1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 14 // 14 // 0 /// ENSGALT00000013166 // ENSEMBL // cdna:novel chromosome:Galgal4:1:930980:934477:1 gene:ENSGALG00000008111 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 14 // 14 // 0 ENSGALT00000013166 // F1NDD3 --- ENSGALT00000013166 // GO:0010883 // regulation of lipid storage // inferred from electronic annotation /// ENSGALT00000013166 // GO:0032526 // response to retinoic acid // inferred from electronic annotation /// ENSGALT00000013166 // GO:0008152 // metabolic process // inferred from electronic annotation ENSGALT00000013166 // GO:0005783 // endoplasmic reticulum // inferred from electronic annotation ENSGALT00000013166 // GO:0003824 // catalytic activity // inferred from electronic annotation --- ENSGALT00000013166 // Pfam // IPR000073 // Alpha/beta hydrolase fold-1 /// ENSGALT00000013166 // Pfam // IPR010463 // Protein of unknown function DUF1057 1 main XM_425258 XM_425258
15384309 15384309 chr1 + 940519 949319 7 AF076291 // GDI2 // GDP dissociation inhibitor 2 // --- // 395854 /// NM_205004 // GDI2 // GDP dissociation inhibitor 2 // --- // 395854 /// ENSGALT00000013282 // GDI2 // GDP dissociation inhibitor 2 // --- // 395854 AF076291 // GenBank // Gallus gallus Rab-GDP dissociation inhibitor mRNA, complete cds. // chr1 // 100 // 100 // 7 // 7 // 0 /// NM_205004 // RefSeq // Gallus gallus GDP dissociation inhibitor 2 (GDI2), mRNA. // chr1 // 100 // 100 // 7 // 7 // 0 /// GENSCAN00000032772 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:1019633:1026854:1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 7 // 7 // 0 /// ENSGALT00000013282 // ENSEMBL // cdna:known chromosome:Galgal4:1:1012026:1028924:1 gene:ENSGALG00000008169 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 7 // 7 // 0 AF076291 // O93382 /// NM_205004 // O93382 /// ENSGALT00000013282 // F1NCZ2 /// ENSGALT00000013282 // O93382 AF076291 // Gga.11578 // blood| brain| bursa of Fabricius| cecum| embryonic tissue| gonad| head| heart| liver| muscle| ovary| small intestine| spleen| testis| thymus|embryo| hatchling| juvenile| adult /// NM_205004 // Gga.11578 // blood| brain| bursa of Fabricius| cecum| embryonic tissue| gonad| head| heart| liver| muscle| ovary| small intestine| spleen| testis| thymus|embryo| hatchling| juvenile| adult /// ENSGALT00000013282 // Gga.11578 // blood| brain| bursa of Fabricius| cecum| embryonic tissue| gonad| head| heart| liver| muscle| ovary| small intestine| spleen| testis| thymus|embryo| hatchling| juvenile| adult /// ENSGALT00000013282 // Gga.52242 // brain AF076291 // GO:0015031 // protein transport // inferred from electronic annotation /// NM_205004 // GO:0015031 // protein transport // inferred from electronic annotation /// ENSGALT00000013282 // GO:0007264 // small GTPase mediated signal transduction // inferred from electronic annotation /// ENSGALT00000013282 // GO:0015031 // protein transport // inferred from electronic annotation /// ENSGALT00000013282 // GO:0032851 // positive regulation of Rab GTPase activity // inferred from electronic annotation ENSGALT00000013282 // GO:0005794 // Golgi apparatus // inferred from electronic annotation /// ENSGALT00000013282 // GO:0009986 // cell surface // inferred from electronic annotation AF076291 // GO:0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// NM_205004 // GO:0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// ENSGALT00000013282 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSGALT00000013282 // GO:0005093 // Rab GDP-dissociation inhibitor activity // inferred from electronic annotation /// ENSGALT00000013282 // GO:0005097 // Rab GTPase activator activity // inferred from electronic annotation --- ENSGALT00000013282 // Pfam // IPR018203 // GDP dissociation inhibitor 1 main AF076291 AF076291
15384322 15384322 chr1 + 990854 999128 8 NM_001199294 // ASB13 // ankyrin repeat and SOCS box containing 13 // --- // 416691 /// ENSGALT00000013685 // ASB13 // ankyrin repeat and SOCS box containing 13 // --- // 416691 NM_001199294 // RefSeq // Gallus gallus ankyrin repeat and SOCS box containing 13 (ASB13), mRNA. // chr1 // 100 // 100 // 8 // 8 // 0 /// GENSCAN00000032776 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:1063813:1076686:1 transcript_biotype:protein_coding // chr1 // 88 // 88 // 7 // 8 // 0 /// ENSGALT00000013685 // ENSEMBL // cdna:known chromosome:Galgal4:1:1068473:1076747:1 gene:ENSGALG00000008401 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 8 // 8 // 0 ENSGALT00000013685 // F1P5P8 NM_001199294 // Gga.10537 // brain| connective tissue| epiphyseal growth plate| limb| liver| muscle| ovary| testis|embryo| adult /// ENSGALT00000013685 // Gga.10537 // brain| connective tissue| epiphyseal growth plate| limb| liver| muscle| ovary| testis|embryo| adult ENSGALT00000013685 // GO:0035556 // intracellular signal transduction // inferred from electronic annotation /// ENSGALT00000013685 // GO:0016567 // protein ubiquitination // inferred from electronic annotation --- ENSGALT00000013685 // GO:0005515 // protein binding // inferred from electronic annotation --- ENSGALT00000013685 // Pfam // IPR001496 // SOCS protein, C-terminal /// ENSGALT00000013685 // Pfam // IPR002110 // Ankyrin repeat 1 main NM_001199294 NM_001199294
15384330 15384330 chr1 + 1072680 1079188 7 NM_001277351 // TUBAL3 // tubulin, alpha-like 3 // --- // 416694 /// ENSGALT00000040237 // TUBA4A // --- // --- // --- NM_001277351 // RefSeq // Gallus gallus tubulin, alpha-like 3 (TUBAL3), mRNA. // chr1 // 100 // 100 // 7 // 7 // 0 /// ENSGALT00000040237 // ENSEMBL // cdna:known chromosome:Galgal4:1:1149164:1155872:1 gene:ENSGALG00000008444 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 7 // 7 // 0 ENSGALT00000040237 // F1P5B0 NM_001277351 // Gga.8347 // head| limb| muscle| ovary|embryo| adult /// ENSGALT00000040237 // Gga.8347 // head| limb| muscle| ovary|embryo| adult NM_001277351 // GO:0007017 // microtubule-based process // inferred from electronic annotation /// NM_001277351 // GO:0051258 // protein polymerization // inferred from electronic annotation /// ENSGALT00000040237 // GO:0006184 // GTP catabolic process // inferred from electronic annotation /// ENSGALT00000040237 // GO:0007017 // microtubule-based process // inferred from electronic annotation /// ENSGALT00000040237 // GO:0007018 // microtubule-based movement // inferred from electronic annotation /// ENSGALT00000040237 // GO:0051258 // protein polymerization // inferred from electronic annotation NM_001277351 // GO:0005737 // cytoplasm // inferred from electronic annotation /// NM_001277351 // GO:0005874 // microtubule // inferred from electronic annotation /// ENSGALT00000040237 // GO:0005737 // cytoplasm // inferred from electronic annotation /// ENSGALT00000040237 // GO:0005856 // cytoskeleton // inferred from electronic annotation /// ENSGALT00000040237 // GO:0005874 // microtubule // inferred from electronic annotation /// ENSGALT00000040237 // GO:0043234 // protein complex // inferred from electronic annotation NM_001277351 // GO:0003924 // GTPase activity // inferred from electronic annotation /// NM_001277351 // GO:0005200 // structural constituent of cytoskeleton // inferred from electronic annotation /// NM_001277351 // GO:0005525 // GTP binding // inferred from electronic annotation /// ENSGALT00000040237 // GO:0000166 // nucleotide binding // inferred from electronic annotation /// ENSGALT00000040237 // GO:0003924 // GTPase activity // inferred from electronic annotation /// ENSGALT00000040237 // GO:0005198 // structural molecule activity // inferred from electronic annotation /// ENSGALT00000040237 // GO:0005525 // GTP binding // inferred from electronic annotation /// ENSGALT00000040237 // GO:0005200 // structural constituent of cytoskeleton // inferred from electronic annotation --- ENSGALT00000040237 // Pfam // IPR003008 // Tubulin/FtsZ, GTPase domain /// ENSGALT00000040237 // Pfam // IPR018316 // Tubulin/FtsZ, 2-layer sandwich domain 1 main NM_001277351 NM_001277351
15384336 15384336 chr1 + 1217430 1229298 8 ENSGALT00000013794 // SLC35B4 // solute carrier family 35, member B4 // --- // 416698 ENSGALT00000013794 // ENSEMBL // cdna:novel chromosome:Galgal4:1:1291175:1303500:1 gene:ENSGALG00000008463 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 8 // 8 // 0 ENSGALT00000013794 // E1BUQ6 ENSGALT00000013794 // Gga.56010 // --- ENSGALT00000013794 // GO:0015788 // UDP-N-acetylglucosamine transport // inferred from electronic annotation /// ENSGALT00000013794 // GO:0015790 // UDP-xylose transport // inferred from electronic annotation /// ENSGALT00000013794 // GO:0055085 // transmembrane transport // inferred from electronic annotation /// ENSGALT00000013794 // GO:0006111 // regulation of gluconeogenesis // inferred from electronic annotation ENSGALT00000013794 // GO:0016021 // integral to membrane // inferred from electronic annotation /// ENSGALT00000013794 // GO:0016020 // membrane // inferred from electronic annotation /// ENSGALT00000013794 // GO:0005794 // Golgi apparatus // inferred from electronic annotation ENSGALT00000013794 // GO:0005462 // UDP-N-acetylglucosamine transmembrane transporter activity // inferred from electronic annotation /// ENSGALT00000013794 // GO:0005464 // UDP-xylose transmembrane transporter activity // inferred from electronic annotation --- ENSGALT00000013794 // Pfam // IPR004853 // Domain of unknown function DUF250 /// ENSGALT00000013794 // Pfam // IPR013657 // UAA transporter 1 main ENSGALT00000013794
15384348 15384348 chr1 + 1507197 1509266 2 --- GENSCAN00000007322 // ENSEMBL // cdna:genscan scaffold:Galgal4:AADN03025626.1:71:1692:-1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 2 // 2 // 0 /// GENSCAN00000027842 // ENSEMBL // cdna:genscan scaffold:Galgal4:AADN03009551.1:220:1398:-1 transcript_biotype:protein_coding // chr1 // 50 // 50 // 1 // 2 // 0 /// GENSCAN00000032754 // ENSEMBL // cdna:genscan chromosome:Galgal4:1:1574513:1667244:1 transcript_biotype:protein_coding // chr1 // 50 // 50 // 1 // 2 // 0 /// ENSGALT00000045104 // ENSEMBL // cdna:novel scaffold:Galgal4:AADN03025626.1:290:1777:-1 gene:ENSGALG00000028848 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 2 // 2 // 0 /// ENSGALT00000023498 // ENSEMBL // cdna:novel chromosome:Galgal4:1:1639594:1641395:1 gene:ENSGALG00000028729 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 50 // 50 // 1 // 2 // 0 ENSGALT00000045104 // R4GFQ3 /// ENSGALT00000023498 // F1N877 --- --- --- ENSGALT00000045104 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSGALT00000045104 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSGALT00000045104 // GO:0046872 // metal ion binding // inferred from electronic annotation /// ENSGALT00000023498 // GO:0005515 // protein binding // inferred from electronic annotation /// ENSGALT00000023498 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSGALT00000023498 // GO:0046872 // metal ion binding // inferred from electronic annotation --- --- 3 main chr1(+):15384348-15384348

Total number of rows: 20804

Table truncated, full table size 32144 Kbytes.




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