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Platform GPL18875 Query DataSets for GPL18875
Status Public on Jun 28, 2014
Title (OID28929)100603_Sus_scrofa_CB_expr_HX12
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Sus scrofa
Manufacturer NimbleGen
Manufacture protocol High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at
Description The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features.  The .ndf and .ngd files are linked below as supplementary files.
Submission date Jun 27, 2014
Last update date Jun 28, 2014
Contact name Xi Xia
Organization name Zhejiang University
Department Institute of Feed Science
Street address 866 Yuhangtang Road
City Hangzhou
State/province Zhejiang
ZIP/Postal code 310058
Country China
Samples (6) GSM1421252, GSM1421253, GSM1421254, GSM1421255, GSM1421256, GSM1421257
Series (1)
GSE58876 Effect of antimicrobial peptide PR-39 on the gene expression of porcine intestinal epithelial cell line (IPEC-J2)

Data table header descriptions
GB_LIST GenBank accession number of sus scrofa

Data table
GI_10080380 BE693220 10080380 gene_id=n/a symbol=n/a Transcribed locus
GI_10086324 AF284498.1 10086324 gene_id=397287 symbol=C5AR1 complement component 5a receptor 1
GI_100913587 DQ525852.1 100913587 gene_id=n/a symbol=n/a Sus scrofa parkin splice variant (PARK2) mRNA, complete cds, alternatively spliced.
GI_100913590 DQ523515.1 100913590 gene_id=733644 symbol=RHCG Rh family, C glycoprotein
GI_10163697 BE749714 10163697 gene_id=n/a symbol=n/a Transcribed locus
GI_10185705 AF228059.1 10185705 gene_id=n/a symbol=n/a Sus scrofa decay-accelerating factor CD55 mRNA, complete cds, alternatively spliced.
GI_10185707 AF228060.1 10185707 gene_id=n/a symbol=n/a Sus scrofa decay-accelerating factor CD55 mRNA, complete cds, alternatively spliced.
GI_1022923 U38202.1 1022923 gene_id=n/a symbol=n/a Sus scrofa immunglobulin VDJ region mRNA, partial cds.
GI_1022924 U38203.1 1022924 gene_id=100037924 symbol=LOC100037924 immunoglobulin VDJ region
GI_10257395 AF188626.1 10257395 gene_id=n/a symbol=n/a Sus scrofa 5-hydroxytryptamine 1B receptor mRNA, complete cds.
GI_10257510 AF239167.2 10257510 gene_id=n/a symbol=n/a Sus scrofa glycine cleavage system T-protein mRNA, partial cds.
GI_10304378 AF288821.1 10304378 gene_id=n/a symbol=n/a Sus scrofa ferritin L subunit mRNA, partial cds.
GI_1041166 D49582 1041166 gene_id=n/a symbol=n/a Rearranged T-cell receptor delta-chain/Vdelta4-Ddeltas-Jdelta4
GI_1041170 D49584 1041170 gene_id=n/a symbol=n/a Rearranged T-cell receptor delta-chain/Vdelta5.1-Ddeltas-Jdelta1
GI_1041668 X92446.1 1041668 gene_id=407060 symbol=HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
GI_104295126 DQ499443.1 104295126 gene_id=733651 symbol=LOC733651 zinc finger protein 265
GI_104295128 DQ499444.1 104295128 gene_id=733697 symbol=AK5 adenylate kinase 5
GI_104295134 DQ499447.1 104295134 gene_id=733652 symbol=TYW3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
GI_104295136 DQ499448.1 104295136 gene_id=733653 symbol=LOC733653 crystallin, zeta (quinone reductase)
GI_104295138 DQ499449.1 104295138 gene_id=733654 symbol=CTH cystathionase (cystathionine gamma-lyase)

Total number of rows: 45022

Table truncated, full table size 6936 Kbytes.

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL18875_100603_Sus_scrofa_CB_expr.ndf.gz 8.2 Mb (ftp)(http) NDF
GPL18875_100603_Sus_scrofa_CB_expr.ngd.gz 1.3 Mb (ftp)(http) NGD

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