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Status
Public on Mar 08, 2014
Title
EmbryoGENE DNA Methylation Array Bovine 2x400K v2.0
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Bos taurus Manufacturer
Agilent Technologies
Manufacture protocol
www.chem.agilent.com
Description
Assembly Bos_taurus_UMD_3.1
Submission date
Mar 06, 2014
Last update date
Mar 08, 2014
Contact name
Eric Fournier
E-mail(s)
eric.fournier@fsaa.ulaval.ca Organization name
Universite Laval
Department
Departement des sciences animales
Street address
2325 Rue de l'Universite
City
Quebec
State/province
Quebec
ZIP/Postal code
G1V 0A6
Country
Canada
Samples (61)
GSM1347849 , GSM1347850 , GSM1347851 , GSM1347852 , GSM1347853 , GSM1694643
GSM1694644 ,
GSM1694645 ,
GSM1694646 ,
GSM1694647 ,
GSM1694648 ,
GSM1694649 ,
GSM1694650 ,
GSM1694651 ,
GSM1694652 ,
GSM1694653 ,
GSM1694654 ,
GSM1694655 ,
GSM1694656 ,
GSM1694657 ,
GSM1694658 ,
GSM2218674 ,
GSM2218675 ,
GSM2218676 ,
GSM2218677 ,
GSM2218678 ,
GSM2218679 ,
GSM2218680 ,
GSM2218681 ,
GSM2570526 ,
GSM2570527 ,
GSM2570528 ,
GSM2570529 ,
GSM2570530 ,
GSM2570531 ,
GSM2570532 ,
GSM2570533 ,
GSM2570978 ,
GSM2570979 ,
GSM2570980 ,
GSM2570981 ,
GSM2570982 ,
GSM2570983 ,
GSM2570984 ,
GSM2570985 ,
GSM2718065 ,
GSM2718066 ,
GSM2718067 ,
GSM2718068 ,
GSM3477204 ,
GSM3477205 ,
GSM3477206 ,
GSM3477207 ,
GSM3672193 ,
GSM3672194 ,
GSM3672195 ,
GSM3672196 ,
GSM3672197 ,
GSM3672198 ,
GSM3672199 ,
GSM3672200 Series (16)
GSE55873 Bovine Day 15 Extra-embryonic membrane (EEM): Male and Female Control vs. Male and Female CSF2 Methylation
GSE69173 Preimplantation stage-specific effect of culture environment on the DNA methylome of bovine blastocysts
GSE83766 Exposure of bovine oocytes and embryos to elevated non-esterified fatty acid concentrations: integration of epigenetic and transcriptomic signatures in resultant blastocysts [DNA methylation]
GSE83768 Exposure of bovine oocytes and embryos to elevated non-esterified fatty acid concentrations: integration of epigenetic and transcriptomic signatures in resultant blastocysts
GSE97515 Exposure of bovine oocytes to elevated insulin concentration (10 ug/ml) during in vitro maturation changes DNA methylation pattern in Day-8-blastocysts – an epigenetic study.
GSE97516 Exposure of bovine oocytes to elevated insulin concentration (0.1 ug/ml) during in vitro maturation changes DNA methylation pattern in Day-8-blastocysts – an epigenetic study.
GSE97517 Exposure of bovine oocytes to insulin concentration (0.1 and 10 ug/ml) during in vitro maturation changes DNA methylation pattern in Day-8-blastocysts - an epigenetic study
GSE97520 DNA methylation analysis of bull semen according to peripubertal age (10vs16 mo)
GSE97521 DNA methylation analysis of bull semen according to peripubertal age (12vs16 mo)
GSE97522 Methylation pattern analysis of bull semen at 10,12 and 16 months old
GSE101895 Metabolic Stress Induces Modifications in the Epigenetic Program of Preimplantation Bovine Embryos
GSE122645 Embryonic response to high beta-hydroxybutyrate (BHB) levels in postpartum dairy cows [methylation]
GSE122646 Embryonic response to high beta-hydroxybutyrate (BHB) levels in postpartum dairy cows
GSE128353 DNA methylation analysis of blastocyst according to peripubertal age of bull (10 vs 16 months)
GSE128354 DNA methylation analysis of blastocyst according to peripubertal age of bull (12 vs 16 months)
GSE128629 The age of the bull influences the transcriptome and epigenome of the blastocysts
Data table header descriptions ID Probe_ID
SEQUENCE Probe sequence
RANGE_GB Accession version (Assembly Bos_taurus_UMD_3.1)
RANGE_START RANGE_END
Data table ID SEQUENCE RANGE_GB RANGE_START RANGE_END EDMA_DIG_01_00252
TCCCCTTGGCAAACAATTTCTGTGGGTTTTAACCAACCTGATGAAGGGCATGCCACTAGG
AC_000158.1
999961
1000020
EDMA_DIG_01_00253
CCTAGTGGCATGCCCTTCATCAGGTTGGTTAAAACCCACAGAAATTGTTTGCCAAGGGGA
AC_000158.1
999961
1000020
EDMA_DIG_01_00525
AAAAGTGAAAATGTTTCTCTCACCTTATTTAAATAGAGAAAATTTATTCTTCAGGTTTAG
AC_000158.1
2000665
2000724
EDMA_DIG_01_00526
CTAAACCTGAAGAATAAATTTTCTCTATTTAAATAAGGTGAGAGAAACATTTTCACTTTT
AC_000158.1
2000665
2000724
EDMA_DIG_01_00772
AAATACAGGCAAATCAATATATGTTGAATTAATTAATTTTGCCAAACAAAGTAGATTCAC
AC_000158.1
3001881
3001940
EDMA_DIG_01_00773
GTGAATCTACTTTGTTTGGCAAAATTAATTAATTCAACATATATTGATTTGCCTGTATTT
AC_000158.1
3001881
3001940
EDMA_DIG_01_00948
TGGCTGCCTCGGTAGCTCTCAGACGCCTTTAAACAGATTTTTTTTTTTCTTAATCCAGCT
AC_000158.1
5000953
5001012
EDMA_DIG_01_00949
AGCTGGATTAAGAAAAAAAAAAATCTGTTTAAAGGCGTCTGAGAGCTACCGAGGCAGCCA
AC_000158.1
5000953
5001012
EDMA_DIG_01_01009
AATTGAATAAGGCAACTGAAGAAAGCAATTAAATGCAGTGCTTCAGGATAGACATCAAGG
AC_000158.1
5999967
6000026
EDMA_DIG_01_01010
CCTTGATGTCTATCCTGAAGCACTGCATTTAATTGCTTTCTTCAGTTGCCTTATTCAATT
AC_000158.1
5999967
6000026
EDMA_DIG_01_01144
TGTTTTGTGATATGTTTACTTAGTTGTCTTAAATAGATACCATTTTACATTTACAAATTT
AC_000158.1
7000482
7000541
EDMA_DIG_01_01145
AAATTTGTAAATGTAAAATGGTATCTATTTAAGACAACTAAGTAAACATATCACAAAACA
AC_000158.1
7000482
7000541
EDMA_DIG_01_01155
TATCATAGCCACAGGCACATAATAGTACTTAATCCATGTTTGCTGACTCAAATAAAATTA
AC_000158.1
8000176
8000235
EDMA_DIG_01_01156
TAATTTTATTTGAGTCAGCAAACATGGATTAAGTACTATTATGTGCCTGTGGCTATGATA
AC_000158.1
8000176
8000235
EDMA_DIG_01_01221
CCTGCTTTTTTGGCAGCAGTTGTTGGCATTAATTAGAATCCCTTGACAGGCAAAAGGTTG
AC_000158.1
9000152
9000211
EDMA_DIG_01_01222
CAACCTTTTGCCTGTCAAGGGATTCTAATTAATGCCAACAACTGCTGCCAAAAAAGCAGG
AC_000158.1
9000152
9000211
EDMA_DIG_01_01349
TTTTTGACTGCTTGTACAGACCAGATTTTTAAAGATCTCATTTGGCTATAAATAGTTCAG
AC_000158.1
11000356
11000415
EDMA_DIG_01_01350
CTGAACTATTTATAGCCAAATGAGATCTTTAAAAATCTGGTCTGTACAAGCAGTCAAAAA
AC_000158.1
11000356
11000415
EDMA_DIG_01_01391
CTGAAGGAGGAAGGAAGCCTCGGAAATTTTAATGTACTTAAACTTGAGTGTGTACATCAT
AC_000158.1
12001155
12001214
EDMA_DIG_01_01392
ATGATGTACACACTCAAGTTTAAGTACATTAAAATTTCCGAGGCTTCCTTCCTCCTTCAG
AC_000158.1
12001155
12001214
414565 44145 Kbytes .Supplementary data files not provided
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